Basic Information:

  VIRBase ID:  

VHID00647518

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Rnf149:  NM_001033135     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Rnf149
miRBase Accession/Entrez ID	MIMAT0001573	67702
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1600023E10Rik//AV037261//C76763//Gm15832//Greu//Greul4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rnf149	chr1:39551810-39551811(-) m6A 3'UTR       25412662 chr1:39551846-39551847(-) m6A 3'UTR       25683224//25412662//24981863 chr1:39551854-39551855(-) m6A 3'UTR       25683224//25412662//24981863 chr1:39551972-39551973(-) m6A 3'UTR       25683224//25412662//24981863//25456834 chr1:39552302-39552303(-) m6A 3'UTR       24981863//26404942 chr1:39552372-39552373(-) m6A 3'UTR       24981863//25569111//26404942//22608085//22575960 chr1:39552379-39552380(-) m6A 3'UTR       24981863//25569111//26404942//22608085//22575960 chr1:39552422-39552423(-) m6A 3'UTR       24981863//25569111//26404942//22575960 chr1:39552427-39552428(-) m6A 3'UTR       24981863//25569111//26404942//22575960 chr1:39565322-39565323(-) m6A 5'UTR//CDS       25412662//24981863//22608085 chr1:39565329-39565330(-) m6A 5'UTR//CDS       25412662//24981863//22608085 chr1:39576921-39576922(-) m6A CDS//intron       25412662//24981863 chr1:39577122-39577123(-) m6A CDS//intron       25412662//24981863//25569111 chr1:39577134-39577135(-) m6A CDS//intron       25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Rnf149	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Rnf149

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar