Detail Information

Basic Information:


  VIRBase ID:  

VHID00647516

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:           Mrpl18:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-9 Mrpl18
miRBase
Accession/Entrez ID
MIMAT0001573 67681
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 1010001C05Rik//C79879//HSPC0//HSPC071//MRP-//MRP-L18

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Mrpl18
chr17:12911351-12911352(-) m6A 3'UTR       24981863
chr17:12911374-12911375(-) m6A 3'UTR       24981863
chr17:12911414-12911415(-) m6A 3'UTR       24981863//25456834//25569111//22608085
chr17:12911504-12911505(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr17:12911537-12911538(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr17:12911542-12911543(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr17:12911638-12911639(-) m6A 3'UTR       25456834//24981863//25569111
chr17:12913773-12913774(-) m6A CDS       25569111
chr17:12913898-12913899(-) m6A CDS//exon       22608085
chr17:12913984-12913985(-) m6A CDS//exon       22608085
chr17:12915950-12915951(-) m6A CDS//exon//intron       25569111
chr17:12916125-12916126(-) m6A 5'UTR//exon       24981863//25569111
chr17:12916291-12916292(-) m6A 5'UTR       25412662
chr17:12916340-12916341(-) m6A 5'UTR       25412662

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-9
Interactor2: Mrpl18

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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