Basic Information:

  VIRBase ID:  

VHID00647509

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Pigm:  NM_026234     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Pigm
miRBase Accession/Entrez ID	MIMAT0001573	67556
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	4933437L05Rik//AI644422//AV302080//C920011G20Rik

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pigm	chr1:172376654-172376655(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr1:172376695-172376696(+) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111 chr1:172376735-172376736(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr1:172376816-172376817(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr1:172376821-172376822(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr1:172376849-172376850(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr1:172376973-172376974(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr1:172377137-172377138(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr1:172377632-172377633(+) m6A CDS       25456834//24981863//25569111//22608085 chr1:172377798-172377799(+) m6A CDS       25456834//24981863//25569111//22608085 chr1:172377848-172377849(+) m6A CDS       25456834//24981863//25569111 chr1:172377938-172377939(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr1:172378012-172378013(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:172378045-172378046(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:172378094-172378095(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:172378130-172378131(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr1:172378250-172378251(+) m6A 3'UTR       25456834//24981863//25569111 chr1:172378472-172378473(+) m6A 3'UTR       25683224//24981863//25456834 chr1:172378853-172378854(+) m6A 3'UTR       25683224//24981863 chr1:172378894-172378895(+) m6A 3'UTR       25683224//24981863 chr1:172378978-172378979(+) m6A 3'UTR       25683224 chr1:172378988-172378989(+) m6A 3'UTR       25683224 chr1:172379001-172379002(+) m6A 3'UTR       25683224 chr1:172379023-172379024(+) m6A 3'UTR       25683224 chr1:172379922-172379923(+) m6A 3'UTR       24981863 chr1:172383100-172383101(+) m6A 3'UTR       24981863 chr1:172383114-172383115(+) m6A 3'UTR       24981863 chr1:172383119-172383120(+) m6A 3'UTR       24981863 chr1:172383304-172383305(+) m6A 3'UTR       - chr1:172383316-172383317(+) m6A 3'UTR       - chr1:172383364-172383365(+) m6A 3'UTR       22608085

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Pigm

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar