Basic Information:

  VIRBase ID:  

VHID00647377

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Ube2d3:  NM_001356597     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Ube2d3
miRBase Accession/Entrez ID	MIMAT0001573	66105
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1100001F19Rik//9430029A22Rik//AA414951

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ube2d3	chr3:135438271-135438272(+) m6A 5'UTR//intron       25456834//25412662//24981863//25569111 chr3:135438292-135438293(+) m6A 5'UTR//intron       25456834//25412662//24981863//25569111 chr3:135438627-135438628(+) m6A 5'UTR//exon//intron       25412662//24981863//25569111 chr3:135438642-135438643(+) m6A 5'UTR//exon//intron       25412662//24981863//25569111 chr3:135438756-135438757(+) m6A 5'UTR//intron       25412662//24981863//25569111 chr3:135438880-135438881(+) m6A exon//intron       25412662//24981863//25456834//25569111 chr3:135439169-135439170(+) m6A 5'UTR//exon//intron       25683224//25412662//24981863//25569111 chr3:135439245-135439246(+) m6A 5'UTR//exon//intron       25683224//25412662//24981863//25569111 chr3:135439365-135439366(+) m6A 5'UTR//exon//intron       25683224//25412662//24981863//25569111//22608085 chr3:135439451-135439452(+) m6A 5'UTR//exon//intron       25412662//25569111//22608085 chr3:135439675-135439676(+) m1A 5'UTR//exon       26863196 chr3:135439680-135439681(+) m6A 5'UTR//exon       24981863//25569111//22608085 chr3:135439723-135439724(+) m6A 5'UTR//exon       24981863//25569111//22608085 chr3:135439771-135439772(+) m6A 5'UTR//exon       24981863//25569111//22608085 chr3:135439811-135439812(+) m6A exon//intron       24981863//25569111//22608085 chr3:135439825-135439826(+) m6A exon//intron       24981863//25569111//22608085 chr3:135439963-135439964(+) m6A exon//intron       25683224 chr3:135440417-135440418(+) m6A exon//intron       25683224 chr3:135440475-135440476(+) m6A exon//intron       25683224 chr3:135440488-135440489(+) m6A exon//intron       25683224 chr3:135440504-135440505(+) m6A exon//intron       25683224 chr3:135462985-135462986(+) m6A 3'UTR//CDS//exon       24981863//25569111 chr3:135463029-135463030(+) m6A 3'UTR//CDS//exon       24981863//25569111 chr3:135463745-135463746(+) m6A CDS//intron       24981863//25569111 chr3:135465219-135465220(+) m6A 3'UTR//CDS//exon       24981863//25569111//22608085 chr3:135465283-135465284(+) m6A 3'UTR//exon       24981863//25569111//22608085 chr3:135465337-135465338(+) m6A 3'UTR//exon       25683224//24981863//25456834//25569111//22608085 chr3:135465404-135465405(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr3:135465426-135465427(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr3:135465445-135465446(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr3:135465467-135465468(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr3:135465500-135465501(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr3:135465553-135465554(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr3:135465558-135465559(+) m6A 3'UTR//exon       25683224//24981863//25456834//25569111 chr3:135465674-135465675(+) m6A 3'UTR//exon       24981863 chr3:135466336-135466337(+) m6A 3'UTR//exon       26404942//22608085 chr3:135466343-135466344(+) m6A 3'UTR//exon       26404942//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ube2d3	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Ube2d3

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar