Basic Information:

  VIRBase ID:  

VHID00647191

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Ccdc43:  NM_025918     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Ccdc43
miRBase Accession/Entrez ID	MIMAT0001573	52715
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2610001E01Rik//D11Ertd707//D11Ertd707e

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ccdc43	chr11:102686245-102686246(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:102686251-102686252(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:102686334-102686335(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:102686378-102686379(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr11:102686399-102686400(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr11:102686404-102686405(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr11:102686438-102686439(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr11:102686483-102686484(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr11:102688378-102688379(-) m6A exon//intron       25683224//25412662//25569111 chr11:102688394-102688395(-) m6A exon//intron       25412662//25569111 chr11:102688407-102688408(-) m6A exon//intron       25412662//25569111 chr11:102688413-102688414(-) m6A exon//intron       25412662//25569111 chr11:102689734-102689735(-) m6A exon//intron       24981863 chr11:102689748-102689749(-) m6A exon//intron       24981863 chr11:102689799-102689800(-) m6A exon//intron       24981863 chr11:102690143-102690144(-) m6A exon//intron       24981863 chr11:102692143-102692144(-) m6A CDS//exon       25412662 chr11:102697607-102697608(-) m6A CDS//exon       24981863//25569111 chr11:102697721-102697722(-) m6A 5'UTR//exon       24981863//25412662//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Ccdc43

Evidence Support:

Prediction-Evidence	Rep
Support Database	RepTar