Basic Information:

  VIRBase ID:  

VHID00647187

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Suz12:  NM_199196     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Suz12
miRBase Accession/Entrez ID	MIMAT0001573	52615
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2610028O16Rik//AI195385//AU016842//AW536442//D11Ertd530//D11Ertd530e//mKIAA0160

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Suz12	chr11:79993131-79993132(+) m6A 5'UTR       25412662//24981863//25456834//25569111 chr11:79993313-79993314(+) m6A 5'UTR       25412662//25456834//25569111 chr11:79993541-79993542(+) m1A CDS       26863196 chr11:80013579-80013580(+) m6A 3'UTR//CDS//exon       25412662//22608085 chr11:80015155-80015156(+) m6A CDS       25412662//24981863//22608085 chr11:80015198-80015199(+) m6A CDS       25412662//24981863//22608085 chr11:80015201-80015202(+) Y CDS//exon       26075521 chr11:80015232-80015233(+) m6A CDS       25412662//24981863//22608085 chr11:80019766-80019767(+) m6A CDS       24981863//22608085 chr11:80022252-80022253(+) m6A CDS       24981863//22608085 chr11:80022262-80022263(+) m6A CDS       24981863//22608085 chr11:80024941-80024942(+) m6A CDS       24981863//22608085 chr11:80025250-80025251(+) m6A CDS       25569111//22608085 chr11:80025268-80025269(+) m6A CDS       25569111//22608085 chr11:80025912-80025913(+) m6A CDS//intron       25412662//25569111//22608085 chr11:80025925-80025926(+) m6A CDS//intron       25412662//25569111//22608085 chr11:80029157-80029158(+) m6A CDS       25412662//25569111//22608085 chr11:80029217-80029218(+) m6A 3'UTR//CDS       25412662//25569111 chr11:80029337-80029338(+) m6A 3'UTR//CDS       25412662//24981863//25569111 chr11:80030064-80030065(+) m6A 3'UTR//CDS       25456834//25412662//24981863//25569111 chr11:80031901-80031902(+) m6A 3'UTR//CDS       25456834//25412662//24981863//25569111//22608085 chr11:80031933-80031934(+) m6A 3'UTR//CDS       25456834//25412662//24981863//25569111//22608085 chr11:80032030-80032031(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:80032081-80032082(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr11:80032091-80032092(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:80032112-80032113(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:80032139-80032140(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:80032165-80032166(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:80032177-80032178(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:80032183-80032184(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:80032192-80032193(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:80032210-80032211(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr11:80032296-80032297(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:80032552-80032553(+) m6A 3'UTR       25569111//22608085 chr11:80032729-80032730(+) m6A 3'UTR       25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Suz12	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Suz12

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar