Basic Information:

  VIRBase ID:  

VHID00647138

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Tor1a:  NM_144884     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Tor1a
miRBase Accession/Entrez ID	MIMAT0001573	30931
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	DQ2//Dyt1//t//To//torsinA

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tor1a	chr2:30960696-30960697(-) m6A 3'UTR//exon       25456834//24981863//25569111 chr2:30960753-30960754(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:30960804-30960805(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:30960822-30960823(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr2:30960895-30960896(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:30960965-30960966(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:30960984-30960985(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:30961061-30961062(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960 chr2:30961163-30961164(-) m6A CDS//exon       25683224//24981863//25569111 chr2:30963476-30963477(-) m6A CDS//exon       25683224//24981863//25569111 chr2:30963518-30963519(-) m6A CDS//exon       25683224//24981863//25569111 chr2:30963665-30963666(-) m6A exon//intron       25683224//22608085 chr2:30963675-30963676(-) m6A exon//intron       25683224//22608085 chr2:30963750-30963751(-) m6A CDS//exon       25683224//22608085 chr2:30963867-30963868(-) m6A CDS//exon       24981863//25569111 chr2:30967159-30967160(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr2:30967164-30967165(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr2:30967207-30967208(-) m6A CDS//exon       25683224//25456834//24981863//25569111//22608085 chr2:30967320-30967321(-) m6A CDS//exon       25683224//25456834//24981863//25569111 chr2:30967445-30967446(-) m6A exon//intron       25683224//25412662//25569111 chr2:30967611-30967612(-) m6A exon//intron       25683224//25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Tor1a	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Tor1a

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar