Basic Information:

  VIRBase ID:  

VHID00646963

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Hsp90b1:  NM_011631     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Hsp90b1
miRBase Accession/Entrez ID	MIMAT0001573	22027
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	end//endoplasmin//ERp//ERp99//gp9//gp96//GRP//GRP94//TA-3//Tar//Targ2//Tr//Tra//Tra-1//Tra1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Hsp90b1	chr10:86691032-86691033(-) m6A 3'UTR//exon       25412662//24981863//25456834//25569111//26404942//22608085 chr10:86691636-86691637(-) m6A CDS//exon       25683224//25412662//24981863//25456834//25569111//26404942//22608085 chr10:86691650-86691651(-) m1A CDS//exon       26863196 chr10:86691657-86691658(-) m6A CDS//exon       25683224//25412662//24981863//25456834//25569111//26404942//22608085 chr10:86691695-86691696(-) m6A CDS//exon       25683224//25412662//24981863//25456834//25569111//22608085 chr10:86691716-86691717(-) m6A CDS//exon       25683224//25412662//24981863//25456834//25569111//22608085 chr10:86691728-86691729(-) m1A CDS//exon       26863196 chr10:86691736-86691737(-) m6A CDS//exon       25683224//25412662//24981863//25456834//25569111//22608085 chr10:86691808-86691809(-) m6A exon//intron       25683224//25412662//24981863 chr10:86692158-86692159(-) m6A CDS//exon       24981863//22608085 chr10:86692209-86692210(-) m6A CDS//exon       24981863//22608085 chr10:86692276-86692277(-) m6A CDS//exon       24981863//26404942//22608085 chr10:86692404-86692405(-) m6A CDS//exon       24981863//26404942//22608085 chr10:86692421-86692422(-) m6A CDS//exon       24981863//26404942//22608085 chr10:86692773-86692774(-) m6A intron       24981863//22608085 chr10:86693388-86693389(-) m6A CDS//exon       24981863//26404942//22608085 chr10:86693917-86693918(-) m6A CDS//exon       24981863//22608085 chr10:86693955-86693956(-) m6A CDS//exon       24981863//22608085 chr10:86693993-86693994(-) m6A CDS//exon       24981863//22608085 chr10:86694132-86694133(-) m6A CDS//exon       24981863//22608085 chr10:86694386-86694387(-) m6A CDS//exon       22608085 chr10:86694391-86694392(-) m6A CDS//exon       22608085 chr10:86694419-86694420(-) m6A CDS//exon       22608085 chr10:86694469-86694470(-) m6A CDS//exon       22608085 chr10:86694483-86694484(-) m6A CDS//exon       22608085 chr10:86694497-86694498(-) m6A CDS//exon       22608085 chr10:86694584-86694585(-) m6A CDS//exon       22608085 chr10:86694591-86694592(-) m6A CDS//exon       22608085 chr10:86695502-86695503(-) m6A CDS//exon       22608085 chr10:86696775-86696776(-) m6A CDS//exon//intron       25412662//24981863//26404942 chr10:86696790-86696791(-) m6A CDS//exon//intron       25412662//24981863 chr10:86696808-86696809(-) m6A CDS//exon//intron       25412662//24981863 chr10:86696825-86696826(-) m6A CDS//exon//intron       25412662//24981863 chr10:86698326-86698327(-) m6A CDS//exon       25412662//24981863 chr10:86698333-86698334(-) m6A CDS//exon       25412662//24981863 chr10:86698431-86698432(-) m6A CDS//exon       24981863//26404942 chr10:86698653-86698654(-) m6A CDS//exon       22608085 chr10:86701706-86701707(-) m6A CDS//exon       22608085 chr10:86701723-86701724(-) m6A CDS//exon       22608085 chr10:86701762-86701763(-) m6A CDS//exon       22608085 chr10:86701797-86701798(-) m6A CDS//exon       25569111//26404942//22608085 chr10:86701869-86701870(-) m6A CDS//exon       24981863//25569111//26404942 chr10:86701912-86701913(-) m6A CDS//exon       24981863//25569111//26404942 chr10:86701928-86701929(-) m6A CDS//exon       24981863//25569111//26404942 chr10:86701993-86701994(-) m6A CDS//exon       24981863//25569111//26404942//22608085 chr10:86702011-86702012(-) m6A CDS//exon       24981863//25569111//26404942//22608085 chr10:86702981-86702982(-) m6A CDS//exon       25569111//22608085 chr10:86703010-86703011(-) m6A CDS//exon       25569111//22608085 chr10:86703084-86703085(-) m6A exon//intron       25412662//24981863//25569111//22608085 chr10:86703492-86703493(-) m6A CDS       25412662//24981863//25569111//26404942//22608085 chr10:86703505-86703506(-) m6A CDS       25412662//24981863//25569111//26404942//22608085 chr10:86703549-86703550(-) m6A CDS       25412662//24981863//25569111//26404942//22608085 chr10:86703592-86703593(-) m1A CDS       26863196 chr10:86704315-86704316(-) m6A CDS       25683224//25412662//24981863//25569111//26404942//22608085 chr10:86704344-86704345(-) m6A CDS       25683224//25412662//24981863//25569111//26404942//22608085 chr10:86705379-86705380(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:86705389-86705390(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:86705423-86705424(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:86705453-86705454(-) m6A 5'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Hsp90b1	Cytosolic polysome Murine plasmacytoma cells (J558)     12923260 Endoplasmic reticulum NIH-3T3 fibroblasts     12923260 ER-bound polysome Murine plasmacytoma cells (J558)     12923260 Nucleus Neuroblastoma cell line (N2A)     22406755 Perinuclear NIH-3T3 fibroblasts     12923260

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Hsp90b1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar