Basic Information:

  VIRBase ID:  

VHID00646729

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Pcdh10:  NM_001098170     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Pcdh10
miRBase Accession/Entrez ID	MIMAT0001573	18526
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	6430521D13Rik//6430703F07Rik//mKIAA1400//OL//OL-pc

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pcdh10	chr3:45378409-45378410(+) m6A 5'UTR       25683224//24981863//22608085 chr3:45378459-45378460(+) m6A 5'UTR       25683224//24981863//22608085 chr3:45378507-45378508(+) m6A 5'UTR       25683224//24981863//22608085 chr3:45378570-45378571(+) m6A 5'UTR       25683224//24981863//22608085 chr3:45378577-45378578(+) m6A 5'UTR       25683224//24981863//22608085 chr3:45378606-45378607(+) m6A 5'UTR       25683224//24981863//22608085 chr3:45378863-45378864(+) m6A 5'UTR       25683224//24981863//22608085 chr3:45378874-45378875(+) m6A 5'UTR       25683224//24981863//22608085 chr3:45379017-45379018(+) m6A 5'UTR       25683224//24981863//22608085 chr3:45379338-45379339(+) m6A CDS       25683224//24981863//22608085 chr3:45379370-45379371(+) m6A CDS       25683224//24981863//22608085 chr3:45379382-45379383(+) m6A CDS       25683224//24981863//22608085 chr3:45379392-45379393(+) m6A CDS       25683224//24981863//22608085 chr3:45379432-45379433(+) m6A CDS       25683224//24981863//22608085 chr3:45379445-45379446(+) m6A CDS       25683224//24981863//22608085 chr3:45379459-45379460(+) m6A CDS       25683224//24981863//22608085 chr3:45379553-45379554(+) m6A CDS       25683224//24981863//22608085 chr3:45379592-45379593(+) m6A CDS       25683224//24981863//22608085 chr3:45379708-45379709(+) m6A CDS       25683224//24981863//22608085 chr3:45379724-45379725(+) m6A CDS       25683224//24981863//22608085 chr3:45379768-45379769(+) m6A CDS       25683224//24981863//22608085 chr3:45379797-45379798(+) m6A CDS       25683224//24981863//22608085 chr3:45379820-45379821(+) m6A CDS       25683224//24981863//22608085 chr3:45379827-45379828(+) m6A CDS       25683224//24981863//22608085 chr3:45380157-45380158(+) m6A CDS       25683224//24981863//22608085 chr3:45380201-45380202(+) m6A CDS       25683224//24981863//22608085 chr3:45380228-45380229(+) Y CDS//exon       26075521 chr3:45380246-45380247(+) m6A CDS       25683224//24981863//22608085 chr3:45380408-45380409(+) m6A CDS       25683224//24981863//22608085 chr3:45380516-45380517(+) m6A CDS       25683224//24981863//22608085 chr3:45380531-45380532(+) m6A CDS       25683224//24981863//22608085 chr3:45380675-45380676(+) m6A CDS       25683224//24981863 chr3:45380717-45380718(+) m6A CDS       25683224//24981863 chr3:45380813-45380814(+) m6A CDS       25683224//24981863 chr3:45380864-45380865(+) m6A CDS       25683224//24981863 chr3:45381001-45381002(+) m6A CDS       25683224//24981863//22608085 chr3:45381036-45381037(+) m6A CDS       25683224//24981863//22608085 chr3:45381131-45381132(+) m6A CDS       25683224//24981863//22608085 chr3:45381146-45381147(+) m6A CDS       25683224//24981863//22608085 chr3:45381323-45381324(+) m6A CDS       25683224//24981863//22608085 chr3:45381345-45381346(+) m6A CDS       25683224//24981863//22608085 chr3:45381379-45381380(+) m6A CDS       25683224//24981863//22608085 chr3:45381389-45381390(+) m6A CDS       25683224//24981863//22608085 chr3:45381486-45381487(+) m6A CDS       25683224//24981863 chr3:45381594-45381595(+) m6A CDS       25683224//24981863 chr3:45381704-45381705(+) m6A CDS       25683224//24981863//22608085 chr3:45381745-45381746(+) m6A CDS       25683224//24981863//22608085 chr3:45381848-45381849(+) m6A CDS       25683224//24981863 chr3:45382453-45382454(+) m6A 3'UTR//intron       24981863//22608085 chr3:45382462-45382463(+) m6A 3'UTR//intron       24981863//22608085 chr3:45382478-45382479(+) m6A 3'UTR//intron       25683224//24981863//22608085 chr3:45382507-45382508(+) m6A 3'UTR//intron       25683224//24981863//22608085 chr3:45382780-45382781(+) m6A 3'UTR//intron       25683224//22608085 chr3:45382837-45382838(+) m6A 3'UTR//intron       25683224//24981863//22608085 chr3:45383571-45383572(+) m6A CDS//exon       25683224//22608085 chr3:45384137-45384138(+) m6A CDS//exon       25683224//22608085 chr3:45384152-45384153(+) m6A CDS//exon       25683224//22608085 chr3:45384159-45384160(+) m6A CDS//exon       25683224//22608085 chr3:45384167-45384168(+) m6A CDS//exon       25683224//22608085 chr3:45392706-45392707(+) m6A CDS//exon       25683224//24981863 chr3:45392718-45392719(+) m6A CDS//exon       25683224//24981863 chr3:45392734-45392735(+) m6A CDS//exon       25683224//24981863 chr3:45392860-45392861(+) m6A CDS//exon       25683224//24981863 chr3:45399363-45399364(+) m6A 3'UTR//intron       25683224//24981863 chr3:45399419-45399420(+) m6A 3'UTR//intron       25683224//24981863 chr3:45419576-45419577(+) m6A 3'UTR//intron       25683224//24981863//22608085 chr3:45419622-45419623(+) m6A 3'UTR//intron       25683224//24981863//22608085 chr3:45419631-45419632(+) m6A 3'UTR//intron       25683224//24981863//22608085 chr3:45419805-45419806(+) m6A 3'UTR//intron       25683224//24981863 chr3:45419850-45419851(+) m6A 3'UTR//intron       25683224//24981863 chr3:45419929-45419930(+) m6A 3'UTR//intron       25683224//24981863 chr3:45419947-45419948(+) m6A 3'UTR//intron       25683224//24981863 chr3:45420246-45420247(+) m6A 3'UTR//intron       25683224//26404942 chr3:45420322-45420323(+) m6A 3'UTR//intron       25683224//26404942//22608085 chr3:45421000-45421001(+) m6A 3'UTR//intron       26404942 chr3:45421043-45421044(+) m6A 3'UTR//intron       26404942 chr3:45423459-45423460(+) m6A 3'UTR//intron       24981863//26404942//22608085 chr3:45423474-45423475(+) m6A 3'UTR//intron       24981863//26404942//22608085 chr3:45423525-45423526(+) m6A 3'UTR//intron       24981863//26404942//22608085 chr3:45423556-45423557(+) m6A 3'UTR//intron       24981863//22608085 chr3:45432532-45432533(+) m6A CDS       25683224//24981863//22608085 chr3:45432586-45432587(+) m6A 3'UTR       25683224//24981863//22608085 chr3:45432613-45432614(+) m6A 3'UTR       25683224//24981863//22608085 chr3:45432629-45432630(+) m6A 3'UTR       25683224//24981863//22608085 chr3:45432667-45432668(+) m6A 3'UTR       25683224//24981863//22608085 chr3:45432676-45432677(+) m6A 3'UTR       25683224//24981863//22608085 chr3:45432768-45432769(+) m6A 3'UTR       25683224//24981863//22608085 chr3:45432832-45432833(+) m6A 3'UTR       24981863//22608085 chr3:45434473-45434474(+) Y 3'UTR//exon       26075521

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Pcdh10

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar