Basic Information:

  VIRBase ID:  

VHID00646680

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-9:  MIMAT0001573          Nbr1:  NR_152788     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-9	Nbr1
miRBase Accession/Entrez ID	MIMAT0001573	17966
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	mKIAA0049

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Nbr1	chr11:101440193(+) A-I      intronic chr11:101440192(+) A-I      intronic chr11:101440185(+) A-I      intronic chr11:101440199(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Nbr1	chr11:101578871(+) A-I intron -    22524474 chr11:101578878(+) A-I intron -    22524474 chr11:101578879(+) A-I intron -    22524474 chr11:101578885(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Nbr1	chr11:101552821-101552822(+) m6A 5'UTR//intron       24981863//25569111 chr11:101552831-101552832(+) m6A 5'UTR//intron       24981863//25569111 chr11:101552838-101552839(+) m6A 5'UTR//intron       24981863//25569111 chr11:101553992-101553993(+) m6A 5'UTR//exon//intron       25412662//24981863//25569111//22575960 chr11:101554000-101554001(+) m6A 5'UTR//exon//intron       25412662//24981863//25569111//22575960 chr11:101555820-101555821(+) m6A 5'UTR//intron       25569111 chr11:101555828-101555829(+) m6A 5'UTR//intron       25569111 chr11:101555868-101555869(+) m6A 5'UTR//intron       25569111 chr11:101556060-101556061(+) m6A 5'UTR//intron       25569111 chr11:101564722-101564723(+) m6A CDS//exon//intron       22608085 chr11:101564739-101564740(+) m6A CDS//exon//intron       22608085 chr11:101564794-101564795(+) m6A CDS//exon//intron       22608085 chr11:101564802-101564803(+) m6A CDS//exon//intron       22608085 chr11:101569741-101569742(+) m6A CDS       25412662//22608085 chr11:101571337-101571338(+) m6A CDS       25412662//22608085 chr11:101571346-101571347(+) m6A CDS       25412662//22608085 chr11:101571370-101571371(+) m6A CDS       25412662//22608085 chr11:101573130-101573131(+) m6A CDS//exon//intron       25412662//22608085 chr11:101575023-101575024(+) m6A CDS//exon       25412662//22608085 chr11:101575190-101575191(+) m6A CDS//exon//intron       25683224//25412662//24981863//25569111 chr11:101575248-101575249(+) m6A CDS//exon       25683224//25412662//24981863//25569111//22575960 chr11:101575272-101575273(+) m6A CDS//exon       25683224//25412662//24981863//25569111//22575960 chr11:101575293-101575294(+) m6A CDS//exon       25683224//25412662//24981863//25569111//22575960 chr11:101575364-101575365(+) m6A CDS//exon       25683224//25412662//24981863//25569111//22575960 chr11:101575395-101575396(+) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085//22575960 chr11:101576317-101576318(+) m6A CDS//exon       25683224//25412662//24981863//25569111//22608085//22575960 chr11:101576449-101576450(+) m6A exon//intron       25683224//25412662//25569111//22608085 chr11:101576482-101576483(+) m6A exon//intron       25683224//25412662//25569111//22608085 chr11:101576502-101576503(+) m6A exon//intron       25683224//25412662//25569111//22608085 chr11:101576579-101576580(+) m6A exon//intron       25412662 chr11:101577961-101577962(+) m6A CDS//exon//intron       25569111 chr11:101580605-101580606(+) m6A 3'UTR//CDS//exon       24981863//25569111 chr11:101580660-101580661(+) m6A 3'UTR//CDS//exon       25456834//24981863//25569111//26404942//22608085//22575960 chr11:101580679-101580680(+) m6A 3'UTR//CDS//exon       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr11:101580760-101580761(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr11:101580881-101580882(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr11:101580925-101580926(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr11:101580966-101580967(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr11:101580986-101580987(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr11:101580991-101580992(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr11:101581029-101581030(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr11:101581217-101581218(+) m6A 3'UTR       24981863//25569111 chr11:101581249-101581250(+) m6A 3'UTR       24981863//25569111//22608085 chr11:101581264-101581265(+) m6A 3'UTR       24981863//25569111//22608085 chr11:101581293-101581294(+) m6A 3'UTR       24981863//25569111//22608085 chr11:101581303-101581304(+) m6A 3'UTR       24981863//25569111//22608085 chr11:101581493-101581494(+) m6A 3'UTR       24981863//25569111//26404942//22608085 chr11:101581543-101581544(+) m6A 3'UTR       24981863//25569111//26404942//22608085 chr11:101581550-101581551(+) m6A 3'UTR       24981863//25569111//26404942//22608085 chr11:101581615-101581616(+) m6A 3'UTR       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-9
Interactor2: Nbr1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar