Basic Information:

  VIRBase ID:  

VHID00646069

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Ctxn1:  NM_183315     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Ctxn1
miRBase Accession/Entrez ID	MIMAT0001572	330695
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	BC028881//Ctxn

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ctxn1	chr8:4257711-4257712(-) m6A 3'UTR       25412662//24981863//22608085 chr8:4257816-4257817(-) m6A 3'UTR       25412662//24981863//25569111//26404942 chr8:4257897-4257898(-) m6A 3'UTR       25412662//24981863//25569111//26404942 chr8:4257909-4257910(-) m6A 3'UTR       25412662//24981863//25569111//26404942 chr8:4258050-4258051(-) m6A 3'UTR       24981863//25569111 chr8:4258114-4258115(-) m6A 3'UTR       24981863//25569111 chr8:4258209-4258210(-) m6A 3'UTR       24981863//25569111 chr8:4258318-4258319(-) m6A 3'UTR       25683224//25412662//24981863//25456834//25569111//26404942//22608085 chr8:4258373-4258374(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085 chr8:4258433-4258434(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:4258465-4258466(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr8:4258613-4258614(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr8:4259056-4259057(-) m6A 5'UTR       25683224//25412662//24981863//25569111//22608085 chr8:4259132-4259133(-) m6A 5'UTR       25683224//25412662//24981863//25569111//22608085 chr8:4259260-4259261(-) m6A 5'UTR       25412662//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Ctxn1	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Ctxn1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar