Basic Information:

  VIRBase ID:  

VHID00645826

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Frem2:  NM_172862     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Frem2
miRBase Accession/Entrez ID	MIMAT0001572	242022
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	6030440P17Rik//8430406N05Rik//b2b1562C//b2b1562Clo//Gm409//my//n//ne//nv1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Frem2	chr3:53515536-53515537(-) m6A 3'UTR       25456834 chr3:53515569-53515570(-) m6A 3'UTR       25456834 chr3:53515603-53515604(-) m6A 3'UTR       25456834 chr3:53515655-53515656(-) m6A 3'UTR       25456834 chr3:53515673-53515674(-) m6A 3'UTR       25456834 chr3:53515700-53515701(-) m6A 3'UTR       25456834//24981863 chr3:53515742-53515743(-) m6A 3'UTR       25456834//24981863 chr3:53515848-53515849(-) m6A 3'UTR       25456834//24981863 chr3:53515888-53515889(-) m6A 3'UTR//exon       25456834 chr3:53515927-53515928(-) m6A 3'UTR//exon       25456834 chr3:53515995-53515996(-) m6A 3'UTR//exon       25456834 chr3:53516056-53516057(-) m6A 3'UTR//exon       25456834 chr3:53516091-53516092(-) m6A 3'UTR//exon       25456834 chr3:53516124-53516125(-) m6A 3'UTR//exon       25456834 chr3:53516222-53516223(-) m6A 3'UTR//exon       25683224//25456834 chr3:53516254-53516255(-) m6A 3'UTR//exon       25683224//25456834 chr3:53516363-53516364(-) m6A 3'UTR//exon       25683224//25456834//24981863//22608085 chr3:53516392-53516393(-) m6A 3'UTR//exon       25683224//25456834//24981863//22608085 chr3:53516461-53516462(-) m6A 3'UTR//exon       25683224//25456834//24981863//22608085 chr3:53516492-53516493(-) m6A 3'UTR//exon       25683224//25456834//24981863//22608085 chr3:53516628-53516629(-) m6A CDS//exon       25683224//25456834//24981863//22608085 chr3:53535322-53535323(-) m6A CDS//exon       25683224 chr3:53535342-53535343(-) m6A CDS//exon       25683224 chr3:53651970-53651971(-) m6A CDS//exon       25456834 chr3:53652048-53652049(-) m6A CDS//exon       25456834 chr3:53652054-53652055(-) m6A CDS//exon       25456834 chr3:53652135-53652136(-) m6A CDS//exon       25456834 chr3:53652197-53652198(-) m6A CDS//exon       25456834 chr3:53652205-53652206(-) m6A CDS//exon       25456834 chr3:53652237-53652238(-) m6A CDS       25456834//24981863 chr3:53652276-53652277(-) m6A CDS       25456834//24981863//25569111 chr3:53652302-53652303(-) m6A CDS       25456834//24981863//25569111 chr3:53652318-53652319(-) m6A CDS       25456834//24981863//25569111//22608085 chr3:53652330-53652331(-) m6A CDS       25456834//24981863//25569111//22608085 chr3:53652438-53652439(-) m6A CDS       25683224//25456834//22608085 chr3:53652452-53652453(-) m6A CDS       25683224//25456834//22608085 chr3:53652528-53652529(-) m6A CDS       25456834 chr3:53652556-53652557(-) m6A CDS       25456834 chr3:53652570-53652571(-) m6A CDS       25456834 chr3:53652603-53652604(-) m6A CDS       25683224//25456834 chr3:53652753-53652754(-) m6A CDS       25683224 chr3:53652768-53652769(-) m6A CDS       25683224 chr3:53652913-53652914(-) m6A CDS       25456834 chr3:53652942-53652943(-) m6A CDS       25456834 chr3:53652984-53652985(-) m6A CDS       25456834//24981863 chr3:53652990-53652991(-) m6A CDS       25456834//24981863 chr3:53653049-53653050(-) m6A CDS       25683224//25456834//24981863 chr3:53653055-53653056(-) m6A CDS       25683224//25456834//24981863 chr3:53653079-53653080(-) m6A CDS       25683224//25456834//24981863 chr3:53653119-53653120(-) m6A CDS       25683224//25456834//24981863 chr3:53653162-53653163(-) m6A CDS       25456834//24981863//22608085 chr3:53653210-53653211(-) m6A CDS       25456834//24981863//22608085 chr3:53653277-53653278(-) m6A CDS       25456834//24981863//22608085 chr3:53653293-53653294(-) m6A CDS       25456834//24981863//22608085 chr3:53653303-53653304(-) m6A CDS       25456834//24981863//22608085 chr3:53653398-53653399(-) m6A CDS       25456834 chr3:53653685-53653686(-) m6A CDS       25456834 chr3:53653767-53653768(-) m6A CDS       25683224//25456834//24981863//22608085 chr3:53653830-53653831(-) m6A CDS       25683224//25456834//24981863//22608085 chr3:53653836-53653837(-) m6A CDS       25683224//25456834//24981863//22608085 chr3:53653898-53653899(-) m6A CDS       25683224//25456834//24981863//22608085 chr3:53653929-53653930(-) m6A CDS       25683224//25456834 chr3:53654307-53654308(-) m6A CDS       22608085 chr3:53654354-53654355(-) m6A CDS       25683224//25456834//24981863//22608085 chr3:53654436-53654437(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:53654453-53654454(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:53654498-53654499(-) m6A CDS       25683224//25456834//25569111//22608085 chr3:53654569-53654570(-) m6A CDS       25456834 chr3:53654862-53654863(-) m6A CDS       25456834 chr3:53654874-53654875(-) m6A CDS       25456834 chr3:53654922-53654923(-) m6A CDS       25683224//25456834 chr3:53655011-53655012(-) m6A CDS       25683224//25456834 chr3:53655027-53655028(-) m6A CDS       25683224//25456834 chr3:53655090-53655091(-) m6A CDS       25683224//25456834 chr3:53655114-53655115(-) m6A CDS       25683224//25456834 chr3:53655379-53655380(-) m6A CDS       25683224//25456834//24981863 chr3:53655589-53655590(-) m6A CDS       25683224//25456834//24981863//25569111 chr3:53655705-53655706(-) m6A CDS       25683224 chr3:53655713-53655714(-) m6A CDS       25683224 chr3:53655774-53655775(-) m6A CDS       25683224//25456834//24981863 chr3:53655801-53655802(-) m6A CDS       25683224//25456834//24981863 chr3:53655809-53655810(-) m6A CDS       25683224//25456834//24981863 chr3:53655837-53655838(-) m6A CDS       25683224//25456834//24981863 chr3:53655858-53655859(-) m6A CDS       25683224//25456834//24981863 chr3:53655878-53655879(-) m6A CDS       25683224//25456834//24981863 chr3:53655903-53655904(-) m6A CDS       25683224//25456834//24981863 chr3:53656047-53656048(-) m6A CDS       25456834 chr3:53656083-53656084(-) m6A CDS       25683224//25456834 chr3:53656113-53656114(-) m6A CDS       25683224//25456834 chr3:53656161-53656162(-) m6A CDS       25683224//25456834 chr3:53656202-53656203(-) m6A CDS       25683224//25456834 chr3:53656272-53656273(-) m6A CDS       25683224//25456834 chr3:53656341-53656342(-) m6A CDS       25683224//25456834//24981863 chr3:53656354-53656355(-) m6A CDS       25683224//25456834//24981863 chr3:53656363-53656364(-) m6A CDS       25683224//25456834 chr3:53656409-53656410(-) m6A CDS       25683224//25456834 chr3:53656468-53656469(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr3:53656519-53656520(-) m6A CDS       25683224//25456834//24981863//25569111 chr3:53656529-53656530(-) m6A CDS       25683224//25456834//24981863//25569111 chr3:53656773-53656774(-) m6A CDS       25683224 chr3:53656797-53656798(-) m6A CDS       25683224 chr3:53657062-53657063(-) m6A CDS       25683224 chr3:53657124-53657125(-) m6A 5'UTR       25683224//25456834//25569111 chr3:53657133-53657134(-) m6A 5'UTR       25683224//25456834//25569111 chr3:53657273-53657274(-) m6A 5'UTR       25456834//25569111 chr3:53657345-53657346(-) m6A 5'UTR       25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Frem2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar