Basic Information:

  VIRBase ID:  

VHID00645822

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Ralgapa2:  NM_001033348     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Ralgapa2
miRBase Accession/Entrez ID	MIMAT0001572	241694
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	A230067G21Rik//AS2//AS250//BC053994//pp250//RGC//RGC2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Ralgapa2	chr2:146302755(-) A-I      intronic chr2:146302773(-) A-I      intronic chr2:146302744(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Ralgapa2	chr2:146477008(-) A-I intron -    16940548 chr2:146477019(-) A-I intron -    16940548 chr2:146477037(-) A-I intron -    16940548

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ralgapa2	chr2:146244432-146244433(-) m6A 3'UTR       24981863 chr2:146244749-146244750(-) m6A 3'UTR       25412662//24981863//25569111//22608085 chr2:146244843-146244844(-) m6A 3'UTR//exon       25412662//24981863//25569111 chr2:146244923-146244924(-) m6A 3'UTR//exon       25412662//24981863//25569111 chr2:146244932-146244933(-) m6A 3'UTR//exon       25412662//24981863//25569111 chr2:146244947-146244948(-) m6A 3'UTR//exon       25412662//24981863//25569111 chr2:146245007-146245008(-) m6A 3'UTR//CDS//exon       25412662//25569111 chr2:146334607-146334608(-) m6A CDS       25569111 chr2:146340390-146340391(-) m6A CDS       25569111 chr2:146341983-146341984(-) m6A CDS       25569111 chr2:146342036-146342037(-) m6A CDS       25456834//25412662//24981863//25569111 chr2:146342169-146342170(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:146342175-146342176(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:146342256-146342257(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:146342318-146342319(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:146342361-146342362(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:146342396-146342397(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:146342482-146342483(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:146342495-146342496(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:146342509-146342510(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr2:146342559-146342560(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:146342593-146342594(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr2:146342619-146342620(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:146342682-146342683(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr2:146345405-146345406(-) m6A CDS       25569111 chr2:146345414-146345415(-) m6A CDS       25569111 chr2:146345447-146345448(-) m6A CDS       25569111 chr2:146404948-146404949(-) m6A CDS//exon       25412662//22608085 chr2:146404954-146404955(-) m6A CDS//exon       25412662//22608085 chr2:146412803-146412804(-) m6A CDS//exon       25412662 chr2:146511843-146511844(-) m6A CDS//exon       25412662

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Ralgapa2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar