Basic Information:

  VIRBase ID:  

VHID00645691

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Fam193a:  NM_001243123     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Fam193a
miRBase Accession/Entrez ID	MIMAT0001572	231128
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Fam193a	chr5:34822058(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Fam193a	chr5:34479409(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Fam193a	chr5:34369957-34369958(+) m6A 5'UTR       25412662//24981863//25569111 chr5:34369996-34369997(+) m6A 5'UTR       25412662//24981863//25456834//25569111 chr5:34370065-34370066(+) m6A 5'UTR       25412662//24981863//25456834//25569111 chr5:34370248-34370249(+) m6A CDS       25412662 chr5:34410665-34410666(+) m6A CDS       25683224 chr5:34410694-34410695(+) m6A CDS       25683224//25412662 chr5:34410770-34410771(+) m6A CDS       25683224//25412662 chr5:34410781-34410782(+) m6A CDS       25683224//25412662 chr5:34420048-34420049(+) m6A CDS       25412662//22608085 chr5:34420084-34420085(+) m6A CDS       25412662//22608085 chr5:34443707-34443708(+) m6A CDS       24981863//22608085 chr5:34443726-34443727(+) m6A CDS       24981863//22608085 chr5:34444666-34444667(+) m6A CDS       24981863//22608085 chr5:34444677-34444678(+) m6A CDS       24981863//22608085 chr5:34444702-34444703(+) m6A CDS       24981863//22608085 chr5:34444783-34444784(+) m6A CDS       24981863 chr5:34444825-34444826(+) m6A CDS       24981863//25569111 chr5:34457971-34457972(+) m6A CDS//intron       24981863//25569111 chr5:34457998-34457999(+) m6A CDS//intron       24981863 chr5:34458007-34458008(+) m6A CDS//intron       24981863 chr5:34458064-34458065(+) m6A CDS//intron       25683224//24981863 chr5:34458070-34458071(+) m6A CDS//intron       25683224//24981863 chr5:34459029-34459030(+) m6A CDS       25683224//24981863 chr5:34459034-34459035(+) m6A CDS       25683224//24981863 chr5:34459274-34459275(+) m6A CDS       25683224 chr5:34461131-34461132(+) m6A CDS       25683224//24981863 chr5:34461157-34461158(+) m6A CDS       25683224//24981863 chr5:34461235-34461236(+) m6A CDS       25683224//24981863 chr5:34461261-34461262(+) m6A CDS       25683224//24981863 chr5:34462257-34462258(+) m6A CDS       25683224//22608085 chr5:34464020-34464021(+) m6A CDS       25683224//22608085 chr5:34464053-34464054(+) m6A CDS       25683224//24981863 chr5:34464136-34464137(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr5:34465686-34465687(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:34465775-34465776(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:34465790-34465791(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:34465844-34465845(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:34465866-34465867(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:34465878-34465879(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:34465885-34465886(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:34465908-34465909(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:34465916-34465917(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:34465964-34465965(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:34465973-34465974(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:34465982-34465983(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:34466051-34466052(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:34466101-34466102(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:34466110-34466111(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:34466152-34466153(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:34466172-34466173(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr5:34466196-34466197(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr5:34466251-34466252(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr5:34466426-34466427(+) m6A CDS       25683224//24981863//25569111 chr5:34466431-34466432(+) m6A CDS       25683224//24981863//25569111 chr5:34475746-34475747(+) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr5:34475758-34475759(+) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr5:34475778-34475779(+) m6A CDS       25683224//25412662//24981863//25456834//25569111 chr5:34475831-34475832(+) m6A 3'UTR//intron       25683224//25412662//24981863//25456834//25569111 chr5:34475940-34475941(+) m6A 3'UTR//intron       25412662 chr5:34476329-34476330(+) m6A 3'UTR//intron       24981863 chr5:34477332-34477333(+) m6A 3'UTR//intron       25456834 chr5:34477345-34477346(+) m6A 3'UTR//intron       25456834 chr5:34477359-34477360(+) m6A 3'UTR//intron       25456834 chr5:34477425-34477426(+) m6A 3'UTR//intron       25456834 chr5:34485664-34485665(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:34485674-34485675(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:34485679-34485680(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:34485689-34485690(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:34485753-34485754(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:34485885-34485886(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:34485892-34485893(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:34485945-34485946(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr5:34485981-34485982(+) m6A 3'UTR       25683224//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Fam193a

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar