Detail Information

Basic Information:


  VIRBase ID:  

VHID00645478

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:           Vezt:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-8-5p Vezt
miRBase
Accession/Entrez ID		 MIMAT0001572 215008
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - A630071D13//A630071D13Rik//AI848282

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Vezt
chr10:93965771-93965772(-) m6A 3'UTR//intron       24981863//22608085
chr10:93966000-93966001(-) m6A 3'UTR//intron       24981863//22608085
chr10:93966006-93966007(-) m6A 3'UTR//intron       24981863
chr10:93966061-93966062(-) m6A 3'UTR//intron       24981863
chr10:93966921-93966922(-) m6A 3'UTR//intron       24981863
chr10:93966963-93966964(-) m6A 3'UTR//intron       24981863
chr10:93966978-93966979(-) m6A 3'UTR//intron       24981863
chr10:93966989-93966990(-) m6A 3'UTR//intron       24981863
chr10:93967012-93967013(-) m6A 3'UTR//intron       24981863
chr10:93967020-93967021(-) m6A 3'UTR//intron       24981863
chr10:93969068-93969069(-) m6A 3'UTR//intron       24981863
chr10:93969173-93969174(-) m6A 3'UTR//intron       24981863//22608085
chr10:93969181-93969182(-) m6A 3'UTR//intron       24981863//22608085
chr10:93969186-93969187(-) m6A 3'UTR//intron       24981863//22608085
chr10:93969196-93969197(-) m6A 3'UTR//intron       24981863//22608085
chr10:93969237-93969238(-) m6A 3'UTR//intron       24981863//22608085
chr10:93969262-93969263(-) m6A 3'UTR//intron       24981863//22608085
chr10:93969278-93969279(-) m6A 3'UTR//intron       24981863//22608085
chr10:93969331-93969332(-) m6A 3'UTR//intron       24981863//22608085
chr10:93969416-93969417(-) m6A 3'UTR//intron       24981863//25569111//22608085
chr10:93969479-93969480(-) m6A 3'UTR//intron       24981863//25569111//22608085
chr10:93969505-93969506(-) m6A 3'UTR//intron       24981863//25569111//22608085
chr10:93969566-93969567(-) m6A 3'UTR//intron       24981863//25569111//22608085
chr10:93969584-93969585(-) m6A 3'UTR//intron       24981863//25569111//22608085
chr10:93969617-93969618(-) m6A 3'UTR//intron       24981863//25569111//22608085
chr10:93969634-93969635(-) m6A 3'UTR//intron       24981863//25569111//22608085
chr10:93969662-93969663(-) m6A 3'UTR//intron       24981863//25569111//22608085
chr10:93969718-93969719(-) m6A 3'UTR//intron       24981863//25569111//22608085
chr10:93969726-93969727(-) m6A 3'UTR//intron       24981863//25569111//22608085
chr10:93969785-93969786(-) m6A 3'UTR//intron       24981863//25456834//22608085
chr10:93969827-93969828(-) m6A 3'UTR//intron       25456834//24981863//22608085
chr10:93969874-93969875(-) m6A 3'UTR//intron       25456834//24981863//22608085
chr10:93969900-93969901(-) m6A 3'UTR//intron       25456834//24981863//22608085
chr10:93969939-93969940(-) m6A 3'UTR//intron       25456834//24981863//25569111//22608085
chr10:93969962-93969963(-) m6A 3'UTR//intron       25456834//24981863//25569111//22608085
chr10:93969987-93969988(-) m6A 3'UTR//intron       25456834//24981863//25569111//22608085
chr10:93970042-93970043(-) m6A 3'UTR//intron       25456834//24981863//25569111//22608085
chr10:93970054-93970055(-) m6A 3'UTR//intron       25456834//24981863//25569111//22608085
chr10:93970132-93970133(-) m6A 3'UTR//intron       25456834//24981863//25569111//22608085
chr10:93970234-93970235(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr10:93970257-93970258(-) m6A CDS//intron       25569111
chr10:93970261-93970262(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr10:93970385-93970386(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr10:93970467-93970468(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr10:93970499-93970500(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr10:93970511-93970512(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr10:93970554-93970555(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr10:93970562-93970563(-) m6A CDS//intron       25683224//25456834//25412662//24981863//25569111//22608085
chr10:93970593-93970594(-) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085
chr10:93970648-93970649(-) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085
chr10:93970676-93970677(-) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085
chr10:93971399-93971400(-) m6A 3'UTR//intron       24981863//22608085
chr10:93971419-93971420(-) m6A 3'UTR//intron       24981863//22608085
chr10:93971470-93971471(-) m6A 3'UTR//intron       24981863//22608085
chr10:93973603-93973604(-) m6A CDS//intron       24981863
chr10:93973952-93973953(-) m6A CDS       24981863
chr10:93973962-93973963(-) m6A CDS       24981863
chr10:93996865-93996866(-) m6A CDS//intron       24981863//25456834//25569111//22608085
chr10:93996930-93996931(-) m6A CDS//intron       25456834//24981863//25569111//22608085
chr10:93996971-93996972(-) m6A CDS//intron       25456834//24981863//25569111
chr10:93996979-93996980(-) m6A CDS//intron       25456834//24981863//25569111
chr10:94000503-94000504(-) m6A CDS       25683224//22608085
chr10:94001827-94001828(-) m6A exon//intron       25683224//22608085
chr10:94001889-94001890(-) m6A exon//intron       25683224//22608085
chr10:94001915-94001916(-) m6A exon//intron       25683224//22608085
chr10:94007019-94007020(-) m6A CDS//exon       24981863//25569111
chr10:94007058-94007059(-) m6A CDS//exon       24981863//25569111
chr10:94020638-94020639(-) m6A CDS//intron       24981863
chr10:94020653-94020654(-) m6A CDS//intron       24981863
chr10:94020671-94020672(-) m6A CDS//intron       24981863
chr10:94020683-94020684(-) m6A CDS//intron       24981863
chr10:94035621-94035622(-) m6A exon//intron       24981863
chr10:94035641-94035642(-) m6A exon//intron       24981863//25569111

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate Vezt
Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-8-5p
Interactor2: Vezt

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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