Basic Information:

  VIRBase ID:  

VHID00645213

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Tmem179:  NM_178915     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Tmem179
miRBase Accession/Entrez ID	MIMAT0001572	104885
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	AI839735

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tmem179	chr12:112500321-112500322(-) m6A 3'UTR       25412662//22608085 chr12:112500362-112500363(-) m6A 3'UTR       25412662//22608085 chr12:112500430-112500431(-) m6A 3'UTR       25412662//24981863//22608085 chr12:112500471-112500472(-) m6A 3'UTR       24981863//22608085 chr12:112500501-112500502(-) m6A 3'UTR       24981863//22608085 chr12:112500581-112500582(-) m6A 3'UTR       24981863//22608085 chr12:112500607-112500608(-) m6A 3'UTR       24981863//22608085 chr12:112500617-112500618(-) m6A 3'UTR       24981863//22608085 chr12:112500716-112500717(-) m6A 3'UTR       24981863//22608085 chr12:112500765-112500766(-) m6A 3'UTR       25412662//24981863//22608085 chr12:112501272-112501273(-) m6A 3'UTR       25412662//22608085 chr12:112501572-112501573(-) m6A 3'UTR       25683224//25412662//24981863//22608085 chr12:112501686-112501687(-) m6A 3'UTR       25412662//24981863//22608085 chr12:112501916-112501917(-) m6A CDS       25683224//25412662//24981863//22608085 chr12:112503296-112503297(-) m6A CDS       25683224//25412662//24981863//22608085 chr12:112504647-112504648(-) m6A CDS       24981863//22608085 chr12:112510751-112510752(-) m6A CDS       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Tmem179	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Tmem179

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar