Basic Information:

  VIRBase ID:  

VHID00645194

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Snx19:  NM_028874     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Snx19
miRBase Accession/Entrez ID	MIMAT0001572	102607
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	3526401K03Rik//AI195321//AI848208//mKIAA0254

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Snx19	chr9:30427358-30427359(+) m6A 5'UTR       24981863//25569111//22608085 chr9:30427472-30427473(+) m6A 5'UTR       25569111//22608085 chr9:30427547-30427548(+) m6A 5'UTR       25683224//25569111//22608085 chr9:30427579-30427580(+) m6A CDS       25683224//25569111//22608085 chr9:30427600-30427601(+) m6A CDS       25683224//22608085 chr9:30427863-30427864(+) m6A CDS       25683224//24981863//25569111//22608085 chr9:30427901-30427902(+) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr9:30428015-30428016(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:30428219-30428220(+) m6A CDS       25683224//24981863//25569111//22608085 chr9:30428266-30428267(+) m6A CDS       25683224//24981863//25569111//22608085 chr9:30428385-30428386(+) m6A CDS       24981863//25569111 chr9:30428404-30428405(+) m6A CDS       24981863//25569111 chr9:30428409-30428410(+) m6A CDS       24981863//25569111 chr9:30428687-30428688(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:30428694-30428695(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:30428715-30428716(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:30428728-30428729(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:30428875-30428876(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:30428887-30428888(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:30428942-30428943(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:30428994-30428995(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:30429003-30429004(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:30429032-30429033(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr9:30429066-30429067(+) m6A CDS       25683224//25456834//24981863//25569111 chr9:30429176-30429177(+) m6A CDS       25683224//24981863//25569111 chr9:30429220-30429221(+) m6A CDS       25683224//24981863//25569111//22608085 chr9:30432240-30432241(+) m6A CDS       25683224//24981863//25569111//22608085 chr9:30432259-30432260(+) m6A CDS       25683224//24981863//25569111//22608085 chr9:30432298-30432299(+) m6A CDS       25683224//24981863//25569111//22608085 chr9:30432330-30432331(+) m6A CDS       25683224//22608085 chr9:30432347-30432348(+) m6A CDS       25683224//22608085 chr9:30433627-30433628(+) m6A CDS       25683224//22608085 chr9:30433650-30433651(+) m6A CDS       25683224//25412662//22608085 chr9:30435833-30435834(+) m6A CDS       25683224//25412662//22608085 chr9:30435844-30435845(+) m6A CDS       25683224//25412662//22608085 chr9:30435864-30435865(+) m6A CDS       25683224//24981863//25412662//22608085 chr9:30435919-30435920(+) m6A CDS       25683224//24981863//25412662//22608085 chr9:30436780-30436781(+) m6A CDS       25683224//24981863//25412662//22608085 chr9:30436836-30436837(+) m6A CDS       25683224//24981863//22608085 chr9:30437396-30437397(+) m6A CDS       25683224//22608085 chr9:30437488-30437489(+) m6A CDS       25683224//22608085 chr9:30440103-30440104(+) m6A CDS       25683224//22608085 chr9:30464470-30464471(+) m6A 3'UTR       25569111 chr9:30464659-30464660(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr9:30464744-30464745(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr9:30464786-30464787(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr9:30464849-30464850(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr9:30464936-30464937(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr9:30464968-30464969(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr9:30465048-30465049(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr9:30465099-30465100(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr9:30465544-30465545(+) m6A 3'UTR       24981863 chr9:30465613-30465614(+) m6A 3'UTR       25683224//24981863 chr9:30465652-30465653(+) m6A 3'UTR       25683224//24981863 chr9:30465692-30465693(+) m6A 3'UTR       25683224//24981863 chr9:30465711-30465712(+) m6A 3'UTR       25683224//24981863 chr9:30466245-30466246(+) m6A 3'UTR       24981863 chr9:30466275-30466276(+) m6A 3'UTR       24981863 chr9:30466356-30466357(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Snx19	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Snx19

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar