Detail Information

Basic Information:


  VIRBase ID:  

VHID00645187

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:           Exoc8:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-8-5p Exoc8
miRBase
Accession/Entrez ID		 MIMAT0001572 102058
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - AI414418//EXO8//EXO84//Exo84p//R74783//SEC8//SEC84

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR Exoc8
chr8:127418022(-) A-I      3'UTR
chr8:127418029(-) A-I      3'UTR
chr8:127417779(-) A-I      3'UTR
chr8:127417711(-) A-I      3'UTR
chr8:127417774(-) A-I      3'UTR
chr8:127417791(-) A-I      3'UTR
chr8:127418090(-) A-I      3'UTR
chr8:127418084(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED Exoc8
chr8:124894122(-) C-I intron -    22448268
chr8:124894184(-) C-I intron -    22448268
chr8:124893874(-) A-I intron -    22524474
chr8:124893879(-) A-I intron -    22524474   //16940548
chr8:124894122(-) A-I intron -    22524474   //16940548
chr8:124894129(-) A-I intron -    22524474   //16940548
chr8:124894184(-) A-I intron -    22524474   //16940548
chr8:124894190(-) A-I intron -    22524474   //16940548
chr8:124893811(-) A-I intron -    16940548
chr8:124893891(-) A-I intron -    16940548

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Exoc8
chr8:124893182-124893183(-) m6A 3'UTR       24981863
chr8:124893248-124893249(-) m6A 3'UTR       24981863
chr8:124893280-124893281(-) m6A 3'UTR       24981863
chr8:124894646-124894647(-) m6A 3'UTR       24981863//25569111
chr8:124894682-124894683(-) m6A 3'UTR       24981863//25456834//25569111
chr8:124894796-124894797(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr8:124894825-124894826(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr8:124894915-124894916(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr8:124894993-124894994(-) m6A 3'UTR       24981863//25569111
chr8:124895026-124895027(-) m6A 3'UTR       24981863//25569111
chr8:124895095-124895096(-) m6A 3'UTR       24981863//25569111
chr8:124895184-124895185(-) m6A 3'UTR       24981863//25569111//22608085
chr8:124895213-124895214(-) m6A 3'UTR       24981863//25569111//22608085
chr8:124895287-124895288(-) m6A 3'UTR       24981863//25569111//22608085
chr8:124895374-124895375(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr8:124895380-124895381(-) m6A 3'UTR       25456834//24981863//25569111//22608085
chr8:124895536-124895537(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr8:124895603-124895604(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr8:124895653-124895654(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr8:124895677-124895678(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr8:124895754-124895755(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr8:124895783-124895784(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr8:124895818-124895819(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr8:124895917-124895918(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr8:124895944-124895945(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr8:124896004-124896005(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr8:124896040-124896041(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr8:124896223-124896224(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr8:124896245-124896246(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr8:124896352-124896353(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr8:124896571-124896572(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr8:124896580-124896581(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr8:124896598-124896599(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr8:124896625-124896626(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr8:124896696-124896697(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085
chr8:124896815-124896816(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr8:124896907-124896908(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr8:124896925-124896926(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr8:124896952-124896953(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr8:124897069-124897070(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr8:124897090-124897091(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr8:124897132-124897133(-) m6A CDS       25683224//25456834//25412662//24981863//25569111
chr8:124897285-124897286(-) m6A CDS       25683224//25412662//24981863//25569111
chr8:124897441-124897442(-) m6A CDS       25683224//25412662//24981863//25569111
chr8:124897465-124897466(-) m6A CDS       25683224//25412662//24981863//25569111
chr8:124897618-124897619(-) m6A CDS       25683224//25412662//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-8-5p
Interactor2: Exoc8

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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