Basic Information:

  VIRBase ID:  

VHID00645185

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Pwwp2b:  NM_001098636     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Pwwp2b
miRBase Accession/Entrez ID	MIMAT0001572	101631
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	AI594893//D7Ertd517//D7Ertd517e//D930023J19Rik//Pww//Pwwp2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Pwwp2b	chr7:139254863-139254864(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:139254887-139254888(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:139254892-139254893(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:139254915-139254916(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:139254941-139254942(+) m6A CDS       25683224//25412662//24981863//25569111 chr7:139254993-139254994(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:139255056-139255057(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:139255094-139255095(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:139255106-139255107(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:139255128-139255129(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:139255144-139255145(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:139255242-139255243(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:139255252-139255253(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:139255288-139255289(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:139255306-139255307(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:139255314-139255315(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:139255374-139255375(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:139255530-139255531(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:139255572-139255573(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:139255702-139255703(+) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr7:139255809-139255810(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:139255867-139255868(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:139255899-139255900(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:139255916-139255917(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:139255950-139255951(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:139255998-139255999(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:139256007-139256008(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:139256063-139256064(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:139256148-139256149(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr7:139256302-139256303(+) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085 chr7:139256329-139256330(+) m6A CDS//intron       25683224//25456834//24981863//25569111//22608085 chr7:139266506-139266507(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr7:139266528-139266529(+) m6A 3'UTR//exon       25683224//25456834//24981863//25569111 chr7:139266560-139266561(+) m6A 3'UTR//exon       25683224//24981863//25569111 chr7:139266617-139266618(+) m6A 3'UTR//exon       25683224//24981863//25569111 chr7:139266757-139266758(+) m6A 3'UTR//exon       25569111 chr7:139266763-139266764(+) m6A 3'UTR//exon       25569111 chr7:139266789-139266790(+) m6A 3'UTR//exon       25569111 chr7:139266882-139266883(+) m6A 3'UTR//exon       24981863 chr7:139266950-139266951(+) m6A 3'UTR//exon       25683224//24981863//25569111 chr7:139267053-139267054(+) m6A 3'UTR//exon       25683224//24981863//25569111 chr7:139267086-139267087(+) m6A 3'UTR//exon       25683224//24981863//25569111 chr7:139267158-139267159(+) m6A 3'UTR//exon       25683224//24981863//25412662 chr7:139267170-139267171(+) m6A 3'UTR//exon       25683224//24981863//25412662 chr7:139267186-139267187(+) m6A 3'UTR//exon       25412662 chr7:139267225-139267226(+) m6A 3'UTR//exon       25412662

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Pwwp2b	Cytoplasm Neuroblastoma cell line (N2A)     22406755 Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Pwwp2b

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar