Basic Information:

  VIRBase ID:  

VHID00645167

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Mob3c:  NM_175308     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Mob3c
miRBase Accession/Entrez ID	MIMAT0001572	100465
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	AW822253//D130076I06Rik//MOB3//Mobkl//Mobkl2c

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Mob3c	chr4:115828126-115828127(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr4:115828146-115828147(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr4:115828206-115828207(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr4:115828212-115828213(+) m6A 5'UTR//exon       25412662//24981863//25569111 chr4:115828660-115828661(+) m6A 5'UTR//intron       25412662//24981863//25569111 chr4:115828687-115828688(+) m6A 5'UTR//intron       25412662//24981863//25569111 chr4:115831288-115831289(+) m6A CDS//exon       24981863//25569111 chr4:115831305-115831306(+) m6A CDS//exon       24981863//25569111 chr4:115831310-115831311(+) m6A CDS//exon       24981863//25569111 chr4:115831398-115831399(+) m6A CDS//exon       25456834//25412662//24981863//25569111 chr4:115831467-115831468(+) m6A CDS//exon       25456834//25412662//24981863//25569111//22608085 chr4:115831638-115831639(+) m6A CDS//exon       25412662//24981863//25569111 chr4:115833650-115833651(+) m6A CDS       25569111 chr4:115833812-115833813(+) m6A CDS       25569111 chr4:115833822-115833823(+) m6A CDS       24981863//25569111 chr4:115834184-115834185(+) m6A 3'UTR       24981863//25569111 chr4:115834195-115834196(+) m6A 3'UTR       24981863//25569111 chr4:115834216-115834217(+) m6A 3'UTR       24981863//25569111 chr4:115834268-115834269(+) m6A 3'UTR       24981863//25569111 chr4:115834279-115834280(+) m6A 3'UTR       24981863//25569111 chr4:115835058-115835059(+) Y 3'UTR//exon       26075521 chr4:115835094-115835095(+) m6A 3'UTR       25683224//24981863 chr4:115835116-115835117(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:115835131-115835132(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:115835138-115835139(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:115835146-115835147(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:115835152-115835153(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:115835158-115835159(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:115835167-115835168(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:115835175-115835176(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:115835233-115835234(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:115835239-115835240(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:115835261-115835262(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:115835311-115835312(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:115835328-115835329(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:115835369-115835370(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:115835396-115835397(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:115835413-115835414(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr4:115835543-115835544(+) m6A 3'UTR       25456834//24981863//25569111 chr4:115835559-115835560(+) m6A 3'UTR       25456834//24981863//25569111 chr4:115835674-115835675(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:115835760-115835761(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:115835772-115835773(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr4:115835865-115835866(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr4:115835874-115835875(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr4:115835900-115835901(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr4:115835920-115835921(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:115835946-115835947(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:115835987-115835988(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:115836021-115836022(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:115836028-115836029(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:115836093-115836094(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:115836175-115836176(+) m6A 3'UTR       24981863//25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Mob3c	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Mob3c

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar