Basic Information:

  VIRBase ID:  

VHID00645044

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Arhgap10:  NM_001363421     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Arhgap10
miRBase Accession/Entrez ID	MIMAT0001572	78514
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	A930033B01Rik//PS//PS-GAP//PSG//PSGAP//PSGAP-m//PSGAP-s

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Arhgap10	chr8:77250567-77250568(-) m6A 3'UTR       25683224//25412662//24981863//25569111//22608085 chr8:77250613-77250614(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr8:77250653-77250654(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr8:77250668-77250669(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr8:77250709-77250710(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr8:77250775-77250776(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr8:77250788-77250789(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr8:77250852-77250853(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr8:77250971-77250972(-) m6A CDS       24981863//25569111 chr8:77250990-77250991(-) m6A CDS       24981863//25569111 chr8:77251001-77251002(-) m6A CDS       24981863//25569111 chr8:77257371-77257372(-) m6A CDS       24981863 chr8:77259071-77259072(-) m6A CDS//intron       24981863 chr8:77259129-77259130(-) m6A CDS//intron       24981863 chr8:77259198-77259199(-) m6A CDS//intron       24981863 chr8:77277195-77277196(-) m6A CDS       25412662//24981863 chr8:77277206-77277207(-) m6A CDS       25412662//24981863 chr8:77277258-77277259(-) m6A CDS       25683224//25412662//24981863 chr8:77277279-77277280(-) m6A CDS       25683224//25412662//24981863 chr8:77310770-77310771(-) m6A CDS       25683224//25412662//24981863//22608085 chr8:77310791-77310792(-) m6A CDS       25683224//25412662//24981863//22608085 chr8:77310871-77310872(-) m6A CDS       25683224//25412662//24981863//22608085 chr8:77344649-77344650(-) m6A CDS       25683224//24981863//22608085 chr8:77344710-77344711(-) m6A CDS       25683224//22608085 chr8:77344723-77344724(-) m6A CDS       25683224//22608085 chr8:77409583-77409584(-) m6A CDS       25412662//22608085 chr8:77409592-77409593(-) m6A CDS       25412662//22608085 chr8:77411024-77411025(-) m6A CDS       25412662//22608085 chr8:77411074-77411075(-) m6A CDS       25412662//22608085 chr8:77411096-77411097(-) m6A CDS       25412662//22608085 chr8:77432781-77432782(-) m6A CDS       25412662//22608085 chr8:77432792-77432793(-) m6A CDS       25412662//22608085 chr8:77450707-77450708(-) m6A CDS       25412662//22608085 chr8:77450848-77450849(-) m6A CDS       25412662//22608085 chr8:77450880-77450881(-) m6A CDS       25412662//22608085 chr8:77517649-77517650(-) m6A CDS       25412662//22608085 chr8:77517689-77517690(-) m6A CDS       25412662 chr8:77517884-77517885(-) m6A 5'UTR       25412662//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Arhgap10	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Arhgap10

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar