Detail Information

Basic Information:


  VIRBase ID:  

VHID00644874

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:           Bmper:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-8-5p Bmper
miRBase
Accession/Entrez ID
MIMAT0001572 73230
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 3110056H04Rik//Cri//Crim3//Cv//CV-//CV-2//Cv2

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Bmper
chr9:23223091-23223092(+) m6A 5'UTR       25412662
chr9:23223241-23223242(+) m6A 5'UTR       25412662
chr9:23223467-23223468(+) m6A 5'UTR       25412662
chr9:23223606-23223607(+) m6A 5'UTR       25412662
chr9:23300996-23300997(+) m6A CDS       25683224//22608085
chr9:23366200-23366201(+) m6A CDS       25683224//22608085
chr9:23366268-23366269(+) m6A CDS       25683224//22608085
chr9:23399405-23399406(+) m6A CDS       25683224//24981863
chr9:23399448-23399449(+) m6A CDS       25683224//24981863
chr9:23399504-23399505(+) m6A CDS       25683224//25412662
chr9:23399522-23399523(+) m6A CDS       25683224//25412662
chr9:23406626-23406627(+) m6A CDS       25683224//25412662
chr9:23406705-23406706(+) m6A CDS       25683224//25412662
chr9:23406771-23406772(+) m6A CDS       25683224//25412662
chr9:23406793-23406794(+) m6A CDS       25683224//25412662
chr9:23406812-23406813(+) m6A CDS       25683224//25412662
chr9:23473459-23473460(+) m6A CDS       25412662//22608085
chr9:23484051-23484052(+) m6A 3'UTR       25683224//24981863
chr9:23484100-23484101(+) m6A 3'UTR       25683224//24981863
chr9:23484182-23484183(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-8-5p
Interactor2: Bmper

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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