Basic Information:

  VIRBase ID:  

VHID00644857

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Prdm4:  NM_001302887     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Prdm4
miRBase Accession/Entrez ID	MIMAT0001572	72843
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1700031E19Rik//2810470D21Rik//AW552272//SC//SC-//SC-1//SC1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Prdm4	chr10:85892008-85892009(-) m6A 3'UTR       25683224//25412662//24981863//25569111 chr10:85892066-85892067(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr10:85892099-85892100(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr10:85892118-85892119(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr10:85892127-85892128(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr10:85892326-85892327(-) m6A 3'UTR       25569111 chr10:85892495-85892496(-) m6A 3'UTR       25569111 chr10:85892502-85892503(-) m6A 3'UTR       25569111 chr10:85892636-85892637(-) m6A 3'UTR       24981863//25456834//25569111 chr10:85892720-85892721(-) m6A 3'UTR       24981863//25569111 chr10:85893000-85893001(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:85893048-85893049(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:85893081-85893082(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:85893086-85893087(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:85893101-85893102(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:85893187-85893188(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:85893194-85893195(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:85893205-85893206(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr10:85893281-85893282(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:85893392-85893393(-) m6A CDS       25683224//25456834//24981863//25569111 chr10:85893405-85893406(-) m6A CDS       25683224//24981863//25569111 chr10:85899204-85899205(-) m6A CDS       25569111 chr10:85899209-85899210(-) m6A CDS       25569111 chr10:85905448-85905449(-) m6A CDS       25569111 chr10:85907298-85907299(-) m6A CDS       25569111 chr10:85907307-85907308(-) m6A CDS       24981863//25569111 chr10:85907319-85907320(-) m6A CDS       24981863//25569111 chr10:85907358-85907359(-) m6A CDS       24981863//25569111 chr10:85907383-85907384(-) m6A CDS       24981863//25569111 chr10:85907577-85907578(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:85907593-85907594(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:85907651-85907652(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:85907835-85907836(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:85907889-85907890(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:85907904-85907905(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:85907924-85907925(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr10:85908044-85908045(-) m6A CDS       24981863//25569111 chr10:85910234-85910235(-) m6A CDS       24981863//25569111 chr10:85916694-85916695(-) m6A 5'UTR       25412662 chr10:85916905-85916906(-) m6A 5'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Prdm4

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar