Basic Information:

  VIRBase ID:  

VHID00644827

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Fbxl20:  NM_028149     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Fbxl20
miRBase Accession/Entrez ID	MIMAT0001572	72194
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2610511F20Rik//4632423N09Rik//AI849362//AL117906//C86145//Fbl//Fbl2//mKIAA4147//S//Sc//Scr

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Fbxl20	chr11:98082811-98082812(-) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr11:98082828-98082829(-) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085 chr11:98082907-98082908(-) m6A 3'UTR       25456834//25412662//24981863//25569111//22608085//22575960 chr11:98083007-98083008(-) m6A 3'UTR       25412662 chr11:98083040-98083041(-) m6A 3'UTR       25412662 chr11:98083070-98083071(-) m6A 3'UTR       25412662//22608085 chr11:98087766-98087767(-) m6A 3'UTR       25412662 chr11:98088122-98088123(-) m6A 3'UTR       25683224//25412662 chr11:98088139-98088140(-) m6A 3'UTR       25683224//25412662 chr11:98088166-98088167(-) m6A 3'UTR       25683224//25412662 chr11:98088485-98088486(-) m6A 3'UTR       25683224 chr11:98088592-98088593(-) m6A 3'UTR       25683224//22608085 chr11:98088611-98088612(-) m6A 3'UTR       25683224//22608085 chr11:98088685-98088686(-) m6A 3'UTR       25683224//22608085 chr11:98089145-98089146(-) m6A 3'UTR       24981863 chr11:98089157-98089158(-) m6A 3'UTR       24981863//25456834 chr11:98089179-98089180(-) m6A 3'UTR       24981863//25456834//25569111 chr11:98089220-98089221(-) m6A 3'UTR       25456834//24981863//25569111 chr11:98089296-98089297(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr11:98089325-98089326(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr11:98089337-98089338(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr11:98089356-98089357(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr11:98089403-98089404(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:98089540-98089541(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:98089565-98089566(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr11:98089623-98089624(-) m6A CDS       25683224//25456834//25412662//24981863//25569111 chr11:98090663-98090664(-) m6A CDS       25683224//25456834//24981863//25569111 chr11:98090705-98090706(-) m6A CDS       24981863//25569111 chr11:98090775-98090776(-) m6A CDS       24981863//25569111//22608085 chr11:98149434-98149435(-) m6A 5'UTR//exon//intron       25412662//25569111 chr11:98149507-98149508(-) m6A 5'UTR//exon//intron       25412662//25569111 chr11:98149574-98149575(-) m6A 5'UTR//exon//intron       25412662//25569111 chr11:98150146-98150147(-) m6A CDS       25412662

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Fbxl20	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Fbxl20

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar