Basic Information:

  VIRBase ID:  

VHID00644733

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Rufy2:  NM_027425     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Rufy2
miRBase Accession/Entrez ID	MIMAT0001572	70432
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2610111M19Rik//AI844453//De//Denn//LZ-FY//LZ-FYVE//ZFYVE1//ZFYVE13

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Rufy2	chr10:62459937(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Rufy2	chr10:62997189(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Rufy2	chr10:62982679-62982680(+) m6A 5'UTR//CDS//exon       25569111 chr10:62994730-62994731(+) m6A CDS       24981863 chr10:62994757-62994758(+) m6A CDS       24981863 chr10:63000308-63000309(+) m6A 3'UTR//CDS       24981863//25412662//22608085 chr10:63000321-63000322(+) m6A 3'UTR//CDS       24981863//25412662//22608085 chr10:63000326-63000327(+) m6A 3'UTR//CDS       24981863//25412662//22608085 chr10:63002239-63002240(+) m6A CDS       24981863 chr10:63002967-63002968(+) m6A CDS//intron       24981863//25412662 chr10:63002973-63002974(+) m6A CDS//intron       24981863//25412662 chr10:63003019-63003020(+) m6A CDS//intron       24981863//25412662//22608085 chr10:63003040-63003041(+) m6A CDS//intron       24981863//25412662//22608085 chr10:63003073-63003074(+) m6A 3'UTR//intron       24981863//25412662//22608085 chr10:63003135-63003136(+) m6A 3'UTR//intron       24981863//22608085 chr10:63003156-63003157(+) m6A 3'UTR//intron       24981863//22608085 chr10:63004749-63004750(+) m6A 3'UTR//CDS//exon       25412662//24981863 chr10:63006641-63006642(+) m6A 3'UTR//CDS//exon       25412662//24981863 chr10:63006666-63006667(+) m6A 3'UTR//CDS//exon       25412662//24981863 chr10:63011739-63011740(+) m6A 3'UTR       25683224//24981863 chr10:63011822-63011823(+) m6A 3'UTR       25683224//24981863 chr10:63013188-63013189(+) m6A 3'UTR//intron       24981863//22608085 chr10:63013195-63013196(+) m6A 3'UTR//intron       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Rufy2	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Rufy2

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar