Basic Information:

  VIRBase ID:  

VHID00644677

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Cdan1:  NM_026891     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Cdan1
miRBase Accession/Entrez ID	MIMAT0001572	68968
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1500015A01Rik//AI448026//AW492297//CDA//CDA-I//CDA1//CDAI//coda

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Cdan1	chr2:120718198-120718199(-) m6A 3'UTR//exon       25683224//25456834//24981863 chr2:120718248-120718249(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:120718257-120718258(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:120718278-120718279(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:120718294-120718295(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr2:120718309-120718310(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr2:120718352-120718353(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr2:120718395-120718396(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr2:120718421-120718422(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr2:120718454-120718455(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr2:120718548-120718549(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:120718562-120718563(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:120718596-120718597(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:120718637-120718638(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr2:120718732-120718733(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120718765-120718766(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120718821-120718822(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120718829-120718830(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120718843-120718844(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120718864-120718865(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111 chr2:120719194-120719195(-) m6A CDS//exon//intron       25569111 chr2:120723202-120723203(-) m6A CDS//exon       25412662//22608085 chr2:120723836-120723837(-) m6A CDS//exon       25412662//22608085 chr2:120724140-120724141(-) m6A CDS//exon       25412662//22608085 chr2:120724150-120724151(-) m6A CDS//exon       25412662//22608085 chr2:120724184-120724185(-) m6A CDS//exon       25412662 chr2:120724349-120724350(-) m6A CDS//exon       25412662 chr2:120730018-120730019(-) m6A CDS//exon       25412662 chr2:120730025-120730026(-) m6A CDS//exon       25412662 chr2:120730376-120730377(-) m6A CDS//exon//intron       25412662//24981863//25569111 chr2:120730434-120730435(-) m6A CDS//exon//intron       25412662//25569111 chr2:120730758-120730759(-) m6A CDS//exon//intron       25683224//25412662//24981863//25569111 chr2:120730781-120730782(-) m6A CDS//exon//intron       25683224//25412662//25569111 chr2:120730907-120730908(-) m6A CDS//exon//intron       25412662//25569111 chr2:120731062-120731063(-) m6A CDS//exon//intron       25683224//25412662//24981863//25569111 chr2:120731121-120731122(-) m6A CDS//exon//intron       25683224//25412662//24981863//25569111 chr2:120731606-120731607(-) m6A exon       25412662 chr2:120737103-120737104(-) m6A intron       24981863//26404942 chr2:120737143-120737144(-) m6A intron       24981863//26404942 chr2:120738106-120738107(-) m6A intron       24981863 chr2:120738119-120738120(-) m6A intron       24981863 chr2:120738126-120738127(-) m6A intron       24981863 chr2:120738161-120738162(-) m6A intron       24981863 chr2:120738262-120738263(-) m6A intron       24981863//22608085 chr2:120738294-120738295(-) m6A intron       25683224//24981863//26404942//22608085 chr2:120738380-120738381(-) m6A intron       25683224//25456834//24981863//26404942//22608085 chr2:120738393-120738394(-) m6A intron       25683224//25456834//24981863//26404942//22608085 chr2:120738400-120738401(-) m6A intron       25683224//25456834//24981863//26404942//22608085 chr2:120738524-120738525(-) m6A intron       24981863//22608085 chr2:120738893-120738894(-) m6A intron       24981863//22608085 chr2:120738964-120738965(-) m6A intron       24981863//22608085 chr2:120738974-120738975(-) m6A intron       24981863//22608085 chr2:120739340-120739341(-) m6A intron       24981863 chr2:120739450-120739451(-) m6A intron       24981863 chr2:120739487-120739488(-) m6A intron       24981863//25456834 chr2:120739581-120739582(-) m6A intron       24981863//25456834//25569111 chr2:120739641-120739642(-) m6A intron       25456834//24981863//25569111 chr2:120739678-120739679(-) m6A intron       25683224//25456834//24981863//25412662//25569111//22608085 chr2:120739743-120739744(-) m6A intron       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120739775-120739776(-) m6A intron       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120739836-120739837(-) m6A intron       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120739979-120739980(-) m6A intron       25456834//24981863//25569111//22608085 chr2:120740051-120740052(-) m6A intron       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120740149-120740150(-) m6A intron       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120745272-120745273(-) m6A exon       25683224//24981863//22608085 chr2:120745309-120745310(-) m6A exon       25683224//24981863//22608085 chr2:120745350-120745351(-) m6A exon       25683224//24981863//22608085 chr2:120745432-120745433(-) m6A exon       24981863//25569111//22608085 chr2:120745495-120745496(-) m6A exon       22608085 chr2:120745606-120745607(-) m6A exon       25683224//24981863 chr2:120745739-120745740(-) m6A exon       25683224//25456834//24981863//25569111//26404942//22608085 chr2:120745772-120745773(-) m6A exon       25683224//25456834//24981863//25569111//22608085 chr2:120745777-120745778(-) m6A exon       25683224//25456834//24981863//25569111//22608085 chr2:120745801-120745802(-) m6A exon       25683224//25456834//24981863//25569111//22608085 chr2:120745808-120745809(-) m6A exon       25683224//25456834//24981863//25569111//22608085 chr2:120745827-120745828(-) m6A exon       25683224//25456834//24981863//25569111//22608085 chr2:120745958-120745959(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120745974-120745975(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120746014-120746015(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120746022-120746023(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120746029-120746030(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120746094-120746095(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120746127-120746128(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120746158-120746159(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120746178-120746179(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120746274-120746275(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120748446-120748447(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120748519-120748520(-) m6A exon       25683224//25456834//24981863//25569111//22608085 chr2:120748539-120748540(-) m6A exon       25683224//25456834//24981863//25569111//22608085 chr2:120748622-120748623(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120748712-120748713(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120748736-120748737(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120748744-120748745(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120748753-120748754(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120748765-120748766(-) m6A exon       25683224//25456834//25412662//24981863//25569111//22608085 chr2:120748800-120748801(-) m6A exon       25683224//25456834//24981863//25412662//25569111//22608085 chr2:120748983-120748984(-) m6A exon       25569111 chr2:120750241-120750242(-) m6A exon       22608085 chr2:120750345-120750346(-) m6A exon       22608085 chr2:120756016-120756017(-) m6A exon       25683224//24981863//22608085 chr2:120760272-120760273(-) m6A exon       25683224//24981863//22608085 chr2:120760320-120760321(-) m6A exon       25683224//22608085 chr2:120790348-120790349(-) m6A exon       25683224//24981863//22608085 chr2:120806765-120806766(-) m6A exon       25683224//24981863//22608085 chr2:120806856-120806857(-) m6A exon       25683224//24981863//22608085 chr2:120825275-120825276(-) m6A intron       25569111//22608085 chr2:120825305-120825306(-) m6A intron       25569111//22608085 chr2:120837168-120837169(-) m6A intron       25569111//22608085 chr2:120837174-120837175(-) m6A intron       25569111//22608085 chr2:120837181-120837182(-) m6A intron       25569111//22608085 chr2:120837231-120837232(-) m6A intron       25569111//22608085 chr2:120850097-120850098(-) m6A exon       25412662//24981863//25569111//22608085 chr2:120850109-120850110(-) m6A exon       25412662//24981863//25569111//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Cdan1	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Cdan1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar