Basic Information:

  VIRBase ID:  

VHID00644630

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Arl13b:  NM_026577     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Arl13b
miRBase Accession/Entrez ID	MIMAT0001572	68146
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	A530097K21Rik//A930014M17Rik//Ar//Arl2l1//C530009C10Rik//h//hnn

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Arl13b	chr16:62817036(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Arl13b	chr16:62795187-62795188(-) m6A 3'UTR       24981863//25456834 chr16:62795274-62795275(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr16:62795320-62795321(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr16:62795342-62795343(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr16:62795360-62795361(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr16:62795446-62795447(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085//22575960 chr16:62795498-62795499(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr16:62795537-62795538(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr16:62795583-62795584(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr16:62795589-62795590(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr16:62795644-62795645(-) m6A CDS//exon       25456834//24981863//25569111//22608085 chr16:62795664-62795665(-) m6A CDS//exon       25456834//24981863//25569111 chr16:62801733-62801734(-) m6A CDS//intron       24981863//25569111 chr16:62801752-62801753(-) m6A CDS//intron       24981863//25569111 chr16:62801761-62801762(-) m6A CDS//intron       24981863//25569111 chr16:62801778-62801779(-) m6A CDS//intron       24981863//25569111 chr16:62802780-62802781(-) m6A CDS//exon       24981863 chr16:62802810-62802811(-) m6A CDS//exon       25412662//24981863 chr16:62802818-62802819(-) m6A CDS//exon       25412662//24981863 chr16:62802832-62802833(-) m6A CDS//exon       25412662//24981863 chr16:62803859-62803860(-) m6A CDS       25412662//24981863 chr16:62803877-62803878(-) m6A CDS       25412662//24981863 chr16:62803910-62803911(-) m6A CDS       25412662//24981863 chr16:62803931-62803932(-) m6A CDS       25412662//24981863 chr16:62803990-62803991(-) m6A CDS       24981863 chr16:62804012-62804013(-) m6A CDS       24981863 chr16:62804025-62804026(-) m6A CDS       24981863 chr16:62806589-62806590(-) m6A CDS       25683224//25412662//24981863 chr16:62806618-62806619(-) m6A CDS       25683224//25412662//24981863 chr16:62806628-62806629(-) m6A CDS       25683224//25412662//24981863 chr16:62811898-62811899(-) m6A CDS       25683224//25412662//24981863 chr16:62811916-62811917(-) m6A CDS       25683224//25412662//24981863 chr16:62811926-62811927(-) m6A CDS       25683224//25412662//24981863 chr16:62811959-62811960(-) m6A CDS       25412662//24981863 chr16:62827137-62827138(-) m6A exon//intron       24981863 chr16:62827195-62827196(-) m6A CDS//exon       24981863 chr16:62827215-62827216(-) m6A CDS//exon       24981863 chr16:62827224-62827225(-) m6A CDS//exon       24981863 chr16:62846904-62846905(-) m6A 5'UTR//exon       25412662 chr16:62846921-62846922(-) m6A 5'UTR//exon       25412662

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Arl13b

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar