Basic Information:

  VIRBase ID:  

VHID00644375

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Tnip1:  NM_001271455     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Tnip1
miRBase Accession/Entrez ID	MIMAT0001572	57783
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	AB//ABIN//ABIN-1//ABIN1//AU018810//Naf1//Ne//Nef//VAN

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Tnip1	chr11:54910809-54910810(-) m6A 3'UTR//exon       24981863//25456834//25569111 chr11:54910909-54910910(-) m6A 3'UTR//exon       25683224//25456834//24981863//25569111//22608085 chr11:54911099-54911100(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr11:54911152-54911153(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr11:54911175-54911176(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr11:54911184-54911185(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr11:54911200-54911201(-) m6A 3'UTR//intron       25683224//25456834//24981863//25569111//22608085//22575960 chr11:54911281-54911282(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr11:54911364-54911365(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr11:54911376-54911377(-) m6A 3'UTR//intron       25683224//25456834//25412662//24981863//25569111//22608085 chr11:54911561-54911562(-) m6A CDS//intron       25683224//25412662//24981863//25569111 chr11:54915513-54915514(-) m6A CDS//intron       25683224//25412662//24981863//25569111 chr11:54915525-54915526(-) m6A CDS//intron       25683224//25412662//24981863//25569111 chr11:54916877-54916878(-) m6A CDS//intron       25683224//25412662//24981863//25569111 chr11:54916960-54916961(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54917276-54917277(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54917314-54917315(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54917905-54917906(-) m6A CDS//exon       25683224//24981863//25569111 chr11:54918611-54918612(-) m6A CDS//exon       25683224//24981863 chr11:54918638-54918639(-) m6A CDS//exon       25683224//24981863 chr11:54920853-54920854(-) m6A CDS//exon//intron       25683224//25412662//24981863 chr11:54920888-54920889(-) m6A CDS//exon//intron       25683224//25412662//24981863//22608085 chr11:54920899-54920900(-) m6A exon//intron       25683224//25412662//24981863//22608085 chr11:54920923-54920924(-) m6A exon//intron       25683224//25412662//24981863//22608085 chr11:54920995-54920996(-) m6A exon//intron       25683224//25412662//24981863 chr11:54921024-54921025(-) m6A exon//intron       25683224//25412662//24981863 chr11:54921034-54921035(-) m6A exon//intron       25683224//25412662//24981863 chr11:54921046-54921047(-) m6A exon//intron       25683224//25412662//24981863 chr11:54924133-54924134(-) m6A CDS//intron       25683224//25412662//24981863 chr11:54924190-54924191(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54924200-54924201(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54924415-54924416(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54924427-54924428(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54926718-54926719(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54929103-54929104(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54929163-54929164(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54929182-54929183(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54929193-54929194(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54929209-54929210(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54930793-54930794(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54930806-54930807(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54934088-54934089(-) m6A CDS//exon       24981863 chr11:54934119-54934120(-) m6A CDS//exon       24981863 chr11:54934154-54934155(-) m6A CDS//exon       24981863 chr11:54936467-54936468(-) m6A CDS//exon       25412662//24981863 chr11:54936486-54936487(-) m6A CDS//exon       25412662//24981863 chr11:54936527-54936528(-) m6A CDS//exon       25412662//24981863 chr11:54937989-54937990(-) m6A CDS//exon       25412662//24981863 chr11:54939665-54939666(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54939697-54939698(-) m6A CDS//exon       25683224//25412662//24981863 chr11:54940831-54940832(-) m6A CDS//exon//intron       25412662//24981863//25569111 chr11:54952398-54952399(-) m6A 5'UTR//intron       25412662//24981863//25569111 chr11:54955879-54955880(-) m6A 5'UTR//intron       25412662//24981863 chr11:54955900-54955901(-) m6A 5'UTR//intron       25412662//24981863 chr11:54955979-54955980(-) m6A 5'UTR//intron       25412662//24981863//25569111 chr11:54962912-54962913(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Tnip1	Cytoplasm Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Tnip1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar