Basic Information:

  VIRBase ID:  

VHID00644233

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Ppp2r2d:  NM_026391     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Ppp2r2d
miRBase Accession/Entrez ID	MIMAT0001572	52432
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1300017E19Rik//D7Ertd753//D7Ertd753e//MDS02//MDS026

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Ppp2r2d	chr7:146072948(+) A-I      intronic chr7:146072846(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Ppp2r2d	chr7:138881163(+) A-I intron -    22524474 chr7:138881265(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Ppp2r2d	chr7:138846197-138846198(+) m6A exon       25456834//25412662//25569111 chr7:138846208-138846209(+) m6A exon       25456834//25412662//25569111 chr7:138846224-138846225(+) m6A exon       25456834//25412662//25569111 chr7:138846255-138846256(+) m6A exon       25456834//25569111 chr7:138846895-138846896(+) m6A exon//intron       25412662 chr7:138870394-138870395(+) m6A 5'UTR//CDS//exon       24981863 chr7:138870476-138870477(+) m6A 3'UTR//5'UTR//CDS//exon       24981863//22608085 chr7:138876563-138876564(+) m6A 3'UTR//CDS       24981863//25569111//26404942 chr7:138876587-138876588(+) m6A CDS       24981863//25569111//26404942 chr7:138876616-138876617(+) m6A CDS       24981863//25569111//26404942 chr7:138876713-138876714(+) m6A CDS       25683224//25456834//24981863//25569111 chr7:138882258-138882259(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr7:138882297-138882298(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr7:138882304-138882305(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085 chr7:138882375-138882376(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr7:138882384-138882385(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr7:138882474-138882475(+) m6A CDS       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr7:138882492-138882493(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr7:138882504-138882505(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr7:138882672-138882673(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:138882696-138882697(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:138882765-138882766(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:138882773-138882774(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr7:138882864-138882865(+) m6A 3'UTR       25456834//24981863//25569111//22608085 chr7:138883023-138883024(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Ppp2r2d

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar