Basic Information:

  VIRBase ID:  

VHID00644084

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Zkscan5:  NM_001359187     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Zkscan5
miRBase Accession/Entrez ID	MIMAT0001572	22757
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	AI132486//AI326970//hKra//hKraba1//Zfp9//Zfp95

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Zkscan5	chr5:145204570-145204571(+) m6A 5'UTR       25456834//25569111 chr5:145204596-145204597(+) m6A 5'UTR       25456834//25569111 chr5:145204648-145204649(+) m6A 5'UTR       25456834//25569111 chr5:145204656-145204657(+) m6A 5'UTR       25456834//25569111 chr5:145204676-145204677(+) m6A 5'UTR       25456834//25569111 chr5:145205280-145205281(+) m6A 5'UTR       24981863//25569111 chr5:145205345-145205346(+) m6A CDS       25683224//24981863//25569111 chr5:145205364-145205365(+) m6A CDS       25683224//24981863//25569111 chr5:145205394-145205395(+) m6A CDS       25683224//24981863//25569111 chr5:145205435-145205436(+) m6A CDS       25683224//24981863//25569111 chr5:145205482-145205483(+) m6A CDS       25412662//24981863//25569111 chr5:145205701-145205702(+) m6A CDS       25412662 chr5:145208586-145208587(+) m6A exon//intron       25412662 chr5:145208631-145208632(+) m6A exon//intron       25412662 chr5:145208667-145208668(+) m6A exon//intron       25412662 chr5:145212516-145212517(+) m6A 3'UTR//CDS//exon//intron       - chr5:145212574-145212575(+) m6A 3'UTR//CDS//exon//intron       25683224 chr5:145212601-145212602(+) m6A 3'UTR//CDS//exon//intron       25683224 chr5:145218427-145218428(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111 chr5:145218482-145218483(+) m6A 3'UTR//CDS       25683224//25412662//24981863//25569111//22608085 chr5:145218583-145218584(+) m6A CDS       25683224//25412662//24981863//25569111 chr5:145218620-145218621(+) m6A CDS       25683224//25412662//25569111 chr5:145220073-145220074(+) m6A CDS       25683224//25456834//24981863//25569111 chr5:145220080-145220081(+) m6A CDS       25683224//25456834//24981863//25569111 chr5:145220085-145220086(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:145220104-145220105(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:145220118-145220119(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:145220125-145220126(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr5:145220185-145220186(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:145220197-145220198(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:145220222-145220223(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:145220249-145220250(+) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr5:145220386-145220387(+) m6A CDS       25683224//25412662//24981863//25569111 chr5:145220634-145220635(+) m6A CDS       25683224//25412662//24981863//25569111 chr5:145220695-145220696(+) m6A CDS       25683224//25412662//24981863//25569111 chr5:145220763-145220764(+) m6A CDS       25683224//24981863//25412662//25569111 chr5:145220873-145220874(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:145220890-145220891(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:145220916-145220917(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:145220944-145220945(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:145221115-145221116(+) m6A CDS       25683224//24981863//25569111 chr5:145221137-145221138(+) m6A CDS       25683224//24981863//25569111 chr5:145221252-145221253(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr5:145221300-145221301(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:145221345-145221346(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:145221395-145221396(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:145221403-145221404(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:145221453-145221454(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:145221468-145221469(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:145221476-145221477(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:145221484-145221485(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:145221576-145221577(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr5:145221642-145221643(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr5:145221679-145221680(+) m6A 3'UTR       25683224//25456834//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Zkscan5

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar