Basic Information:

  VIRBase ID:  

VHID00644000

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Strap:  NM_011499     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Strap
miRBase Accession/Entrez ID	MIMAT0001572	20901
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	AW557906//C78091//C79202//U//Unrip

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Strap	chr6:137735140-137735141(+) m6A 5'UTR       25412662//24981863//25456834//25569111 chr6:137735230-137735231(+) m6A 5'UTR       25412662//24981863//25456834//25569111 chr6:137736365-137736366(+) m6A CDS       22608085 chr6:137736376-137736377(+) m6A CDS       22608085 chr6:137745112-137745113(+) m6A exon//intron       22608085 chr6:137745124-137745125(+) m6A exon//intron       22608085 chr6:137745139-137745140(+) m6A exon//intron       22608085 chr6:137745328-137745329(+) m6A exon//intron       22608085 chr6:137745598-137745599(+) m6A CDS//exon       22608085 chr6:137745605-137745606(+) m6A CDS//exon       22608085 chr6:137748772-137748773(+) m6A CDS       25569111//22608085 chr6:137748790-137748791(+) m6A CDS       25412662//25569111//22608085 chr6:137748805-137748806(+) m6A CDS       25412662//25569111//22608085 chr6:137749317-137749318(+) m6A exon//intron       25412662//24981863//25569111 chr6:137749369-137749370(+) m6A CDS//exon       25412662//24981863//25569111 chr6:137749379-137749380(+) m6A CDS//exon       25412662//24981863//25569111 chr6:137749410-137749411(+) m6A CDS//exon       25412662//24981863//25569111//26404942 chr6:137750634-137750635(+) m6A 3'UTR//exon       25456834//24981863//25569111//26404942//22608085//22575960 chr6:137750649-137750650(+) m6A 3'UTR//exon       25456834//24981863//25569111//26404942//22608085//22575960 chr6:137750654-137750655(+) m6A 3'UTR//exon       25456834//24981863//25569111//26404942//22608085//22575960 chr6:137750664-137750665(+) m6A 3'UTR//exon       25456834//24981863//25569111//26404942//22608085//22575960 chr6:137750750-137750751(+) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085//22575960 chr6:137751040-137751041(+) m6A 3'UTR       24981863//25569111//26404942 chr6:137751051-137751052(+) m6A 3'UTR       24981863//25569111//26404942 chr6:137751142-137751143(+) m6A 3'UTR       24981863//26404942 chr6:137751191-137751192(+) m6A 3'UTR       24981863 chr6:137751213-137751214(+) m6A 3'UTR       24981863 chr6:137751218-137751219(+) m6A 3'UTR       24981863 chr6:137751250-137751251(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Strap	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Strap

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar