Basic Information:

  VIRBase ID:  

VHID00643945

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Sar1a:  NM_001358488     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Sar1a
miRBase Accession/Entrez ID	MIMAT0001572	20224
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1600019H17Rik//S//Sara//Sara1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Sar1a	chr10:61680338-61680339(+) m6A 5'UTR       24981863//25569111 chr10:61680346-61680347(+) m6A 5'UTR       24981863//25569111 chr10:61685087-61685088(+) m6A CDS       25569111//22608085 chr10:61685107-61685108(+) m6A CDS       22608085 chr10:61685121-61685122(+) m6A CDS       22608085 chr10:61685153-61685154(+) m6A CDS       22608085 chr10:61685563-61685564(+) m6A CDS       25569111//22608085 chr10:61686431-61686432(+) m6A CDS       25569111//22608085 chr10:61689791-61689792(+) m6A CDS       25683224//25569111//22608085 chr10:61689825-61689826(+) m6A CDS       25683224//24981863//25569111//22608085 chr10:61689839-61689840(+) m6A CDS       25683224//24981863//25569111 chr10:61689862-61689863(+) m6A CDS       25683224//24981863//25569111 chr10:61689893-61689894(+) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr10:61691408-61691409(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr10:61691437-61691438(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr10:61691465-61691466(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr10:61691479-61691480(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr10:61691603-61691604(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr10:61691650-61691651(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr10:61691666-61691667(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111 chr10:61692802-61692803(+) m6A 3'UTR       24981863//25569111//22608085 chr10:61692887-61692888(+) m6A 3'UTR       24981863//25569111//22608085 chr10:61692994-61692995(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr10:61692999-61693000(+) m6A 3'UTR       25683224//25456834//24981863//25569111 chr10:61693062-61693063(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942 chr10:61693095-61693096(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942 chr10:61693177-61693178(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr10:61693183-61693184(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr10:61693237-61693238(+) m6A 3'UTR       25683224//25456834//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Sar1a	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Sar1a

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar