Basic Information:

  VIRBase ID:  

VHID00643862

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Prkcb:  NM_001316672     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Prkcb
miRBase Accession/Entrez ID	MIMAT0001572	18751
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	Pkc//PKC-B//PKC-Be//PKC-Beta//Pkcb//Prkc//Prkcb1//Prkcb2

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Prkcb	chr7:122289450-122289451(+) m6A CDS       25683224//22608085 chr7:122290101-122290102(+) m6A exon//intron       25683224//22608085 chr7:122363697-122363698(+) m6A intron       25683224//22608085 chr7:122425021-122425022(+) m6A CDS//exon       25683224//22608085 chr7:122457228-122457229(+) m6A CDS//exon       25683224//22608085 chr7:122457297-122457298(+) m6A CDS//exon       25683224//22608085 chr7:122516858-122516859(+) m6A CDS       25683224//22608085 chr7:122516889-122516890(+) m6A CDS       25683224//22608085 chr7:122516895-122516896(+) m6A CDS       25683224//22608085 chr7:122516925-122516926(+) m6A CDS       25683224//22608085 chr7:122516932-122516933(+) m6A CDS       25683224//22608085 chr7:122516938-122516939(+) m6A CDS       25683224//22608085 chr7:122516974-122516975(+) m6A CDS       25683224//22608085 chr7:122518061-122518062(+) m6A CDS       25683224//22608085 chr7:122518067-122518068(+) m6A CDS       25683224//22608085 chr7:122518074-122518075(+) m6A CDS       25683224//22608085 chr7:122518100-122518101(+) m6A CDS       25683224//22608085 chr7:122518152-122518153(+) m6A CDS       25683224//22608085 chr7:122544674-122544675(+) m6A CDS       25683224//22608085 chr7:122544717-122544718(+) m6A CDS       25683224//22608085 chr7:122544727-122544728(+) m6A CDS       25683224//22608085 chr7:122568165-122568166(+) m6A CDS       25683224//22608085 chr7:122568301-122568302(+) m6A CDS       25683224//22608085 chr7:122590053-122590054(+) m6A CDS       25683224//22608085 chr7:122590121-122590122(+) m6A CDS       25683224//22608085 chr7:122590147-122590148(+) m6A CDS       25683224//22608085 chr7:122590166-122590167(+) m6A CDS       25683224//22608085 chr7:122593967-122593968(+) m6A exon//intron       25683224//22608085 chr7:122594584-122594585(+) m6A exon//intron       25683224//22608085 chr7:122594636-122594637(+) m6A CDS//exon       25683224//22608085 chr7:122594870-122594871(+) m6A exon//intron       25683224//22608085 chr7:122594901-122594902(+) m6A exon//intron       25683224//22608085 chr7:122594994-122594995(+) m6A CDS//exon       25683224//22608085 chr7:122595015-122595016(+) m6A CDS//exon       25683224//22608085 chr7:122595100-122595101(+) m6A exon//intron       25683224//22608085 chr7:122595135-122595136(+) m6A exon//intron       25683224//22608085 chr7:122600164-122600165(+) m6A exon//intron       25683224//22608085 chr7:122600700-122600701(+) m6A CDS//exon       25683224//22608085 chr7:122600744-122600745(+) m6A CDS//exon       25683224//22608085 chr7:122600787-122600788(+) m6A CDS//exon       25683224//22608085 chr7:122600820-122600821(+) m6A CDS//exon       25683224//22608085 chr7:122627674-122627675(+) m6A CDS//exon//intron       25683224//22608085 chr7:122627795-122627796(+) m6A CDS//exon//intron       25683224//24981863//26404942 chr7:122627826-122627827(+) m6A 3'UTR//exon//intron       25683224//24981863 chr7:122627949-122627950(+) m6A 3'UTR//exon//intron       25683224//22608085 chr7:122628032-122628033(+) m6A 3'UTR//exon//intron       25683224//22608085 chr7:122628080-122628081(+) m6A 3'UTR//intron       25683224//22608085 chr7:122628184-122628185(+) m6A 3'UTR//intron       25683224//22608085 chr7:122628314-122628315(+) m6A 3'UTR//intron       25683224//22608085 chr7:122628411-122628412(+) m6A 3'UTR//intron       25683224//22608085 chr7:122628523-122628524(+) m6A 3'UTR//intron       25683224//22608085 chr7:122628558-122628559(+) m6A 3'UTR//intron       25683224//22608085 chr7:122628590-122628591(+) m6A 3'UTR//intron       25683224//22608085 chr7:122630888-122630889(+) Y intron       26075521 chr7:122633584-122633585(+) m6A exon//intron       25683224//24981863//26404942 chr7:122633748-122633749(+) m6A 3'UTR//CDS//exon       25683224//24981863 chr7:122633757-122633758(+) m6A 3'UTR//CDS//exon       25683224//24981863 chr7:122633800-122633801(+) m6A 3'UTR//CDS//exon       25683224//24981863//26404942 chr7:122633818-122633819(+) m6A 3'UTR//CDS//exon       25683224//24981863//26404942 chr7:122633832-122633833(+) m6A 3'UTR//CDS//exon       25683224//24981863//26404942 chr7:122633838-122633839(+) m6A 3'UTR//CDS//exon       25683224//24981863//26404942 chr7:122634072-122634073(+) m6A 3'UTR//exon       25683224//26404942//22608085 chr7:122634126-122634127(+) m6A 3'UTR//exon       25683224//26404942//22608085 chr7:122634136-122634137(+) m6A 3'UTR//exon       25683224//26404942//22608085 chr7:122634149-122634150(+) m6A 3'UTR//exon       25683224//26404942//22608085 chr7:122634164-122634165(+) m6A 3'UTR//exon       25683224//26404942//22608085 chr7:122634353-122634354(+) m6A 3'UTR//exon       25683224//22608085

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Prkcb

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar