Detail Information

Basic Information:


  VIRBase ID:  

VHID00643497

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:           Dbnl:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-8-5p Dbnl
miRBase
Accession/Entrez ID
MIMAT0001572 13169
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - AB//Abp1//mAb//mAbp1//SH3//SH3P7

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Dbnl
chr11:5788544-5788545(+) m6A 5'UTR       25683224//25412662//24981863//25569111//22608085
chr11:5788569-5788570(+) m6A CDS       25683224//25412662//24981863//25569111//22608085
chr11:5793721-5793722(+) m6A CDS       25683224//24981863//25569111//22608085
chr11:5796763-5796764(+) m6A CDS       25683224//25412662//24981863//22608085
chr11:5797030-5797031(+) m1A CDS       26863196
chr11:5797036-5797037(+) m6A CDS       25683224//25412662//24981863//25569111
chr11:5797148-5797149(+) m6A CDS       25683224//25412662//24981863//25569111
chr11:5797287-5797288(+) m6A CDS       25683224//25412662//24981863//25569111
chr11:5797320-5797321(+) m6A CDS       25683224//25412662//24981863//25569111
chr11:5797325-5797326(+) m6A CDS       25683224//25412662//24981863//25569111
chr11:5798062-5798063(+) m6A CDS       25683224//25412662//24981863//25569111//22608085
chr11:5798259-5798260(+) m6A CDS       24981863//25569111//22608085
chr11:5798270-5798271(+) m6A CDS       24981863//25569111//22608085
chr11:5798299-5798300(+) m6A CDS       24981863//25569111//22608085
chr11:5798315-5798316(+) m6A CDS       24981863//25569111//22608085
chr11:5799259-5799260(+) m6A CDS       24981863//25569111//22608085
chr11:5799298-5799299(+) m6A CDS       25683224//25569111//22608085
chr11:5799892-5799893(+) m6A CDS       25683224//25569111//22608085
chr11:5800006-5800007(+) m6A 3'UTR       25683224//24981863//25569111//26404942
chr11:5800095-5800096(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr11:5800107-5800108(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr11:5800112-5800113(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr11:5800257-5800258(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr11:5800291-5800292(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr11:5800312-5800313(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr11:5800419-5800420(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085
chr11:5800463-5800464(+) m6A 3'UTR       24981863//25569111//22608085
chr11:5800483-5800484(+) m6A 3'UTR       24981863//25569111//22608085
chr11:5800797-5800798(+) m6A 3'UTR       25569111//22608085

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-8-5p
Interactor2: Dbnl

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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