Detail Information

Basic Information:


  VIRBase ID:  

VHID00643411

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:           Casp7:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-8-5p Casp7
miRBase
Accession/Entrez ID
MIMAT0001572 12369
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - AI314680//casp//caspase-7//CMH-1//ICE-//ICE-IAP3//mCASP-7//Mch3

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Casp7
chr19:56397229-56397230(+) m6A 5'UTR       25683224//25412662//24981863
chr19:56404431-56404432(+) m6A CDS       25683224//24981863//25412662
chr19:56404494-56404495(+) m6A CDS       25683224//24981863
chr19:56441551-56441552(+) m6A 3'UTR       24981863
chr19:56441635-56441636(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111
chr19:56441681-56441682(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111
chr19:56441708-56441709(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111
chr19:56441733-56441734(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111
chr19:56441739-56441740(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111
chr19:56441749-56441750(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111
chr19:56441776-56441777(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111
chr19:56441799-56441800(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111
chr19:56441810-56441811(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111
chr19:56441820-56441821(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111
chr19:56441909-56441910(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-8-5p
Interactor2: Casp7

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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