Basic Information:

  VIRBase ID:  

VHID00643405

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Capn1:  NM_001110504     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Capn1
miRBase Accession/Entrez ID	MIMAT0001572	12333
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	Ca//Cap//Capa-1//Capa1//mu-c//mu-calpin

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Capn1	chr19:5988731-5988732(-) m6A 3'UTR       25683224//25412662 chr19:5988765-5988766(-) m6A 3'UTR       25683224//25412662 chr19:5988770-5988771(-) m6A 3'UTR       25683224//25412662 chr19:5988817-5988818(-) m6A 3'UTR       25412662 chr19:5988896-5988897(-) m6A 3'UTR       25412662 chr19:5989068-5989069(-) m6A 3'UTR       25412662 chr19:5989077-5989078(-) m6A 3'UTR       25412662 chr19:5989109-5989110(-) m6A 3'UTR       25412662//24981863 chr19:5989228-5989229(-) m6A 3'UTR       25412662//24981863 chr19:5989258-5989259(-) m6A 3'UTR       25412662//24981863 chr19:5992407-5992408(-) m6A CDS       25412662//22608085 chr19:5993890-5993891(-) m6A CDS       25412662//22608085 chr19:5993900-5993901(-) m6A CDS       25412662//22608085 chr19:5994046-5994047(-) m6A CDS       25412662//22608085 chr19:5994595-5994596(-) m6A CDS       25412662//22608085 chr19:5994682-5994683(-) m6A CDS       25412662//22608085 chr19:5997713-5997714(-) m6A CDS       25412662//22608085 chr19:5997721-5997722(-) m6A CDS       25412662//22608085 chr19:5997753-5997754(-) m6A CDS       25412662 chr19:5997850-5997851(-) m6A CDS       25412662 chr19:6007259-6007260(-) m6A CDS       25412662 chr19:6007332-6007333(-) m6A CDS       25412662 chr19:6007375-6007376(-) m6A CDS       25683224//25412662 chr19:6007397-6007398(-) m6A CDS       25683224//25412662 chr19:6007550-6007551(-) m6A CDS       25683224//25412662//22608085 chr19:6007559-6007560(-) m6A CDS       25683224//25412662//22608085 chr19:6008689-6008690(-) m6A CDS       25683224//25412662//22608085 chr19:6008717-6008718(-) m6A CDS       25683224//25412662//22608085 chr19:6008735-6008736(-) m6A CDS       25683224//25412662//22608085 chr19:6014399-6014400(-) m6A CDS       25412662//25569111 chr19:6015119-6015120(-) m6A 5'UTR//intron       25412662//24981863//25569111 chr19:6015137-6015138(-) m6A 5'UTR//intron       25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Capn1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar