Basic Information:

  VIRBase ID:  

VHID00643310

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-8-5p:  MIMAT0001572          Abca1:  NM_013454     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-8-5p	Abca1
miRBase Accession/Entrez ID	MIMAT0001572	11303
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	ABC//ABC-1//Abc1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Abca1	chr4:53032161-53032162(-) m6A 3'UTR       24981863//25456834 chr4:53032258-53032259(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr4:53032285-53032286(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr4:53032296-53032297(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr4:53032350-53032351(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr4:53032362-53032363(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr4:53032386-53032387(-) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085//22575960 chr4:53032486-53032487(-) m6A 3'UTR       25683224//24981863 chr4:53032743-53032744(-) m6A 3'UTR       25683224//24981863//25569111 chr4:53032813-53032814(-) m6A 3'UTR       25683224//24981863//25569111 chr4:53032856-53032857(-) m6A 3'UTR       25683224//24981863 chr4:53033391-53033392(-) m6A 3'UTR       25569111 chr4:53033405-53033406(-) m6A 3'UTR       25569111 chr4:53033503-53033504(-) m6A 3'UTR       24981863//25569111//22608085 chr4:53033511-53033512(-) m6A 3'UTR       24981863//25569111//22608085 chr4:53033655-53033656(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr4:53033664-53033665(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr4:53033677-53033678(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr4:53033779-53033780(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:53033835-53033836(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:53034010-53034011(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:53034015-53034016(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr4:53034033-53034034(-) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr4:53034060-53034061(-) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr4:53034072-53034073(-) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr4:53035350-53035351(-) m6A CDS       25683224//25456834//24981863//25412662//25569111//22608085//22575960 chr4:53035367-53035368(-) m6A CDS       25683224//24981863//25569111//22608085 chr4:53035398-53035399(-) Y CDS//exon       26075521 chr4:53035460-53035461(-) m6A CDS       24981863 chr4:53035468-53035469(-) m6A CDS       24981863 chr4:53036953-53036954(-) m6A CDS//exon       25683224//22608085 chr4:53036970-53036971(-) m6A CDS//exon       25683224//22608085 chr4:53038174-53038175(-) m6A CDS//exon       25683224//22608085 chr4:53038267-53038268(-) m6A CDS//exon       25683224//25412662//22608085 chr4:53042322-53042323(-) m6A CDS       25683224//25412662//22608085 chr4:53042349-53042350(-) m6A CDS       25683224//25412662//22608085 chr4:53042373-53042374(-) m6A CDS       25683224//25412662//22608085 chr4:53042744-53042745(-) m6A CDS       25683224//22608085 chr4:53042759-53042760(-) m6A CDS       25683224//22608085 chr4:53042786-53042787(-) m6A CDS       25683224//22608085 chr4:53044146-53044147(-) m6A CDS       25683224//22608085 chr4:53045778-53045779(-) m6A CDS       25683224//22608085 chr4:53062480-53062481(-) m6A CDS       25683224//25412662//22608085 chr4:53062490-53062491(-) m6A CDS       25683224//25412662//22608085 chr4:53062495-53062496(-) m6A CDS       25683224//25412662//22608085 chr4:53062513-53062514(-) m6A CDS       25683224//25412662//22608085 chr4:53062544-53062545(-) m6A CDS       25683224//25412662//22608085 chr4:53062549-53062550(-) m6A CDS       25683224//25412662//22608085 chr4:53065909-53065910(-) m6A CDS       25683224//25412662//22608085 chr4:53065928-53065929(-) m6A CDS       25683224//25412662//22608085 chr4:53065965-53065966(-) m6A CDS       25683224//22608085 chr4:53065981-53065982(-) m6A CDS       25683224//22608085 chr4:53067071-53067072(-) m6A CDS       25683224//22608085 chr4:53068767-53068768(-) m6A CDS       25683224//22608085 chr4:53068823-53068824(-) m6A CDS       25683224//22608085 chr4:53069796-53069797(-) m6A CDS       25683224//22608085 chr4:53069862-53069863(-) m6A CDS       25683224//22608085 chr4:53069880-53069881(-) m6A CDS       25683224//22608085 chr4:53070081-53070082(-) m6A CDS       25683224//22608085 chr4:53071836-53071837(-) m6A CDS       25683224//22608085 chr4:53071868-53071869(-) m6A CDS       25683224//22608085 chr4:53071900-53071901(-) m6A CDS       25683224//22608085 chr4:53071964-53071965(-) m6A CDS       25683224//22608085 chr4:53072965-53072966(-) m6A CDS       25683224//22608085 chr4:53074250-53074251(-) m6A CDS       25683224//22608085 chr4:53074322-53074323(-) m6A CDS       25683224//22608085 chr4:53075180-53075181(-) m6A CDS       25412662 chr4:53076929-53076930(-) m6A CDS       25683224//22608085 chr4:53076962-53076963(-) m6A CDS       25683224//22608085 chr4:53077952-53077953(-) m6A CDS       25683224//22608085 chr4:53078062-53078063(-) m6A CDS       25683224//22608085 chr4:53078097-53078098(-) m6A CDS       25683224//22608085 chr4:53080887-53080888(-) m6A CDS       25683224//22608085 chr4:53081952-53081953(-) m6A CDS       25683224//22608085 chr4:53082135-53082136(-) m6A CDS       25683224//22608085 chr4:53084472-53084473(-) m6A CDS       25683224//22608085 chr4:53084551-53084552(-) m6A CDS       25683224//22608085 chr4:53085114-53085115(-) m6A CDS       25683224//22608085 chr4:53085134-53085135(-) m6A CDS       25683224//22608085 chr4:53085277-53085278(-) m6A CDS       25683224//22608085 chr4:53085287-53085288(-) m6A CDS       25683224//22608085 chr4:53086030-53086031(-) m6A CDS       25683224//22608085 chr4:53086092-53086093(-) m6A CDS       25683224//22608085 chr4:53086116-53086117(-) m6A CDS       25683224//22608085 chr4:53086126-53086127(-) m6A CDS       25683224//22608085 chr4:53086151-53086152(-) m6A CDS       25683224//22608085 chr4:53086179-53086180(-) m6A CDS       25683224//22608085 chr4:53089808-53089809(-) m6A CDS       25683224//22608085 chr4:53089823-53089824(-) m6A CDS       25683224//25412662//22608085 chr4:53089836-53089837(-) m6A CDS       25683224//25412662//22608085 chr4:53089855-53089856(-) m6A CDS       25683224//25412662//22608085 chr4:53089905-53089906(-) m6A CDS       25683224//25412662//22608085 chr4:53089910-53089911(-) m6A CDS       25683224//25412662//22608085 chr4:53095671-53095672(-) m6A CDS       25412662//22608085 chr4:53107024-53107025(-) m6A CDS       25412662//22608085 chr4:53132931-53132932(-) m6A CDS       25683224//22608085 chr4:53132975-53132976(-) Y CDS//exon       26075521 chr4:53143935-53143936(-) m6A CDS       25683224//22608085 chr4:53159693-53159694(-) m6A 5'UTR       25683224//24981863 chr4:53159703-53159704(-) m6A 5'UTR       25683224//24981863 chr4:53159803-53159804(-) m6A 5'UTR       25683224//25412662//24981863//25569111 chr4:53159863-53159864(-) m6A 5'UTR       25683224//25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-8-5p
Interactor2: Abca1

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar