Basic Information:

  VIRBase ID:  

VHID00643034

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:  MIMAT0001570          Crtc1:  NM_001004062     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-7-5p	Crtc1
miRBase Accession/Entrez ID	MIMAT0001570	382056
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	AI413414//Mect1//mKIAA0616//R74955//TOR//TORC1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Crtc1	chr8:72917467(-) A-I      intronic chr8:72919084(-) A-I      intronic chr8:72923279(-) A-I      intronic chr8:72917431(-) A-I      intronic chr8:72917424(-) A-I      intronic chr8:72919068(-) A-I      intronic chr8:72919081(-) A-I      intronic chr8:72917437(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Crtc1	chr8:70393525(-) A-I intron -    22524474 chr8:70393532(-) A-I intron -    22524474 chr8:70393538(-) A-I intron -    22524474 chr8:70393568(-) A-I intron -    22524474 chr8:70395169(-) A-I intron -    22524474 chr8:70395182(-) A-I intron -    22524474 chr8:70395185(-) A-I intron -    22524474 chr8:70399380(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Crtc1	chr8:70382455-70382456(-) Y 3'UTR//exon       26075521 chr8:70384458-70384459(-) m6A 3'UTR//exon       25683224//24981863 chr8:70384558-70384559(-) m6A 3'UTR//exon       24981863//22608085 chr8:70384578-70384579(-) m6A 3'UTR//exon       24981863//22608085 chr8:70385003-70385004(-) m6A 3'UTR//exon       25683224 chr8:70385011-70385012(-) m6A 3'UTR//exon       25683224 chr8:70385107-70385108(-) m6A 3'UTR//exon       25683224//24981863//25569111 chr8:70385224-70385225(-) m6A 3'UTR//exon       25569111 chr8:70385411-70385412(-) m6A 3'UTR//exon       25456834//25412662//24981863//25569111//22608085 chr8:70385476-70385477(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:70385556-70385557(-) m6A 3'UTR//exon       25683224//25456834//24981863//25412662//25569111//22608085 chr8:70385566-70385567(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:70385592-70385593(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:70386070-70386071(-) m6A 3'UTR//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:70386133-70386134(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:70386148-70386149(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:70386178-70386179(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:70386201-70386202(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr8:70386253-70386254(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:70386300-70386301(-) m6A CDS//exon       25683224//25456834//25412662//24981863//25569111//22608085 chr8:70387596-70387597(-) m6A CDS//exon       24981863//25569111 chr8:70387602-70387603(-) Y CDS//exon       26075521 chr8:70391897-70391898(-) m6A CDS//exon       25412662//24981863 chr8:70392102-70392103(-) m6A CDS//exon       25683224//25412662 chr8:70393048-70393049(-) m6A CDS//exon       25683224//25412662 chr8:70393134-70393135(-) m6A exon//intron       25683224//25412662 chr8:70393180-70393181(-) m6A exon//intron       25683224//25412662 chr8:70393426-70393427(-) m6A exon//intron       25412662 chr8:70393438-70393439(-) m6A exon//intron       25412662 chr8:70394178-70394179(-) m6A exon//intron       25412662 chr8:70394191-70394192(-) m6A exon//intron       25412662 chr8:70394297-70394298(-) m6A exon//intron       25412662 chr8:70397831-70397832(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr8:70397927-70397928(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr8:70397936-70397937(-) m6A CDS//exon       25683224//25412662//24981863//25569111 chr8:70400628-70400629(-) m6A CDS//exon       25683224//25412662//25569111 chr8:70400650-70400651(-) m6A CDS//exon       25683224//25412662 chr8:70400659-70400660(-) m6A CDS//exon       25683224//25412662 chr8:70400673-70400674(-) m6A CDS//exon       25412662 chr8:70402523-70402524(-) m6A CDS//exon       25683224//25412662 chr8:70402569-70402570(-) m6A exon//intron       25683224//25412662 chr8:70402595-70402596(-) m6A exon//intron       25683224//25412662 chr8:70402613-70402614(-) m6A exon//intron       25683224//25412662 chr8:70406128-70406129(-) m6A CDS//exon       25683224//22608085 chr8:70406153-70406154(-) m6A CDS//exon       25683224//22608085 chr8:70406178-70406179(-) m6A CDS//exon       25683224//22608085 chr8:70408907-70408908(-) m6A CDS//exon       25412662//24981863 chr8:70408931-70408932(-) m6A CDS//exon       25412662//24981863 chr8:70431225-70431226(-) m6A exon//intron       25412662//24981863 chr8:70439457-70439458(-) m6A CDS//exon       25412662//24981863//25569111 chr8:70439544-70439545(-) m6A CDS//exon       25412662//24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-7-5p
Interactor2: Crtc1

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar