Basic Information:

  VIRBase ID:  

VHID00643009

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:  MIMAT0001570          Shisa6:  NM_001034874     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-7-5p	Shisa6
miRBase Accession/Entrez ID	MIMAT0001570	380702
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	CKAMP//ckamp52//Gm879

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Shisa6	chr11:66212123-66212124(-) m6A 3'UTR       24981863//22608085 chr11:66212169-66212170(-) m6A 3'UTR       24981863//22608085 chr11:66212217-66212218(-) m6A 3'UTR       24981863//22608085 chr11:66212299-66212300(-) m6A 3'UTR       24981863 chr11:66212319-66212320(-) m6A 3'UTR       24981863 chr11:66212459-66212460(-) m6A 3'UTR       24981863//22608085 chr11:66212499-66212500(-) m6A 3'UTR       24981863//22608085 chr11:66212602-66212603(-) m6A 3'UTR       25683224//24981863 chr11:66212665-66212666(-) m6A 3'UTR       25683224//24981863 chr11:66212863-66212864(-) m6A 3'UTR       25683224//24981863 chr11:66212887-66212888(-) m6A 3'UTR       25683224//24981863 chr11:66216096-66216097(-) m6A 3'UTR       25683224//22608085 chr11:66216166-66216167(-) m6A 3'UTR       25683224//24981863 chr11:66216224-66216225(-) m6A 3'UTR       25683224//24981863 chr11:66216531-66216532(-) m6A 3'UTR       25683224//24981863 chr11:66216613-66216614(-) m6A 3'UTR       25683224//24981863 chr11:66216619-66216620(-) m6A 3'UTR       25683224//24981863 chr11:66216682-66216683(-) m6A 3'UTR       25683224//24981863 chr11:66216907-66216908(-) m6A 3'UTR       25683224//24981863//22608085 chr11:66216979-66216980(-) m6A 3'UTR       25683224//24981863//22608085 chr11:66217085-66217086(-) m6A 3'UTR       25683224//22608085 chr11:66217124-66217125(-) m6A 3'UTR       25683224//22608085 chr11:66217153-66217154(-) m6A 3'UTR       25683224//22608085 chr11:66217198-66217199(-) m6A 3'UTR       25683224//22608085 chr11:66217243-66217244(-) m6A 3'UTR       25683224//24981863 chr11:66217278-66217279(-) m6A 3'UTR       25683224//24981863 chr11:66217429-66217430(-) m6A 3'UTR       25683224//25456834//24981863//22608085 chr11:66217488-66217489(-) m6A CDS       25683224//25456834//24981863//22608085 chr11:66217552-66217553(-) m6A CDS       25683224//25456834//24981863//22608085 chr11:66217587-66217588(-) m6A CDS       25683224//25456834//24981863//22608085 chr11:66217664-66217665(-) m6A CDS       25683224//25456834//24981863//22608085 chr11:66217737-66217738(-) m6A CDS       25683224//25456834//24981863//22608085 chr11:66217760-66217761(-) m6A CDS       25683224//25456834//24981863//22608085 chr11:66217795-66217796(-) m6A CDS       25683224//25456834//24981863//22608085 chr11:66217868-66217869(-) m6A CDS       25683224//24981863//22608085 chr11:66525730-66525731(-) m6A CDS       25456834//24981863 chr11:66525779-66525780(-) m6A CDS       25456834//24981863 chr11:66525784-66525785(-) m6A CDS       25456834//24981863 chr11:66525849-66525850(-) m6A CDS       25456834//24981863 chr11:66525854-66525855(-) m6A CDS       25456834//24981863

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-7-5p
Interactor2: Shisa6

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar