Detail Information

Basic Information:


  VIRBase ID:  

VHID00642939

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:           B430306N03Rik:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-7-5p B430306N03Rik
miRBase
Accession/Entrez ID
MIMAT0001570 320148
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - Treml6

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase B430306N03Rik
chr17:48320717-48320718(+) m6A 3'UTR//intron       24981863
chr17:48320742-48320743(+) m6A 3'UTR//intron       24981863
chr17:48320751-48320752(+) m6A 3'UTR//intron       24981863
chr17:48322416-48322417(+) m6A 3'UTR//CDS       24981863
chr17:48322440-48322441(+) m6A 3'UTR//CDS       24981863
chr17:48322449-48322450(+) m6A 3'UTR//CDS       24981863
chr17:48322463-48322464(+) m6A 3'UTR//CDS       24981863
chr17:48323951-48323952(+) m6A 3'UTR//CDS       24981863
chr17:48323967-48323968(+) m6A 3'UTR//CDS       24981863
chr17:48323975-48323976(+) m6A 3'UTR//CDS       24981863
chr17:48324006-48324007(+) m6A 3'UTR//CDS       24981863
chr17:48324015-48324016(+) m6A 3'UTR//CDS       24981863
chr17:48324024-48324025(+) m6A 3'UTR//CDS       24981863
chr17:48324108-48324109(+) m6A 3'UTR//CDS       24981863//22575960
chr17:48324150-48324151(+) m6A 3'UTR//CDS       24981863//22575960
chr17:48324263-48324264(+) m6A 3'UTR       24981863//22575960
chr17:48324308-48324309(+) m6A 3'UTR       24981863//22575960
chr17:48324346-48324347(+) m6A 3'UTR       24981863//22575960
chr17:48324487-48324488(+) m6A 3'UTR       24981863
chr17:48324499-48324500(+) m6A 3'UTR       24981863
chr17:48324559-48324560(+) m6A 3'UTR       24981863
chr17:48324576-48324577(+) m6A 3'UTR       24981863
chr17:48324657-48324658(+) m6A 3'UTR       24981863
chr17:48324694-48324695(+) m6A 3'UTR       24981863//22575960
chr17:48324722-48324723(+) m6A 3'UTR       24981863//22575960
chr17:48324741-48324742(+) m6A 3'UTR       24981863//22575960
chr17:48324766-48324767(+) m6A 3'UTR       24981863
chr17:48324819-48324820(+) m6A 3'UTR       24981863
chr17:48324841-48324842(+) m6A 3'UTR       24981863
chr17:48324874-48324875(+) m6A 3'UTR       24981863//22608085
chr17:48325005-48325006(+) m6A 3'UTR       24981863
chr17:48325244-48325245(+) m6A 3'UTR       24981863
chr17:48325263-48325264(+) m6A 3'UTR       24981863
chr17:48325324-48325325(+) m6A 3'UTR//intron       24981863
chr17:48325333-48325334(+) m6A 3'UTR//intron       24981863
chr17:48325353-48325354(+) m6A 3'UTR//intron       24981863
chr17:48325493-48325494(+) m6A 3'UTR       24981863
chr17:48325602-48325603(+) m6A 3'UTR       24981863
chr17:48325614-48325615(+) m6A 3'UTR       24981863
chr17:48325661-48325662(+) m6A 3'UTR       24981863
chr17:48325696-48325697(+) m6A 3'UTR       24981863
chr17:48325736-48325737(+) m6A 3'UTR       24981863
chr17:48325752-48325753(+) m6A 3'UTR       24981863
chr17:48325915-48325916(+) m6A 3'UTR       24981863
chr17:48325941-48325942(+) m6A 3'UTR       24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-7-5p
Interactor2: B430306N03Rik

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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