Basic Information:

  VIRBase ID:  

VHID00642905

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:  MIMAT0001570          Lrrc4b:  NM_198250     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-7-5p	Lrrc4b
miRBase Accession/Entrez ID	MIMAT0001570	272381
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	A830007M12//Lr//Lrig4//Ngl3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	Lrrc4b	chr7:51710861(+) A-I      intronic chr7:51710852(+) A-I      intronic chr7:51710855(+) A-I      intronic chr7:51710864(+) A-I      intronic chr7:51710873(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	Lrrc4b	chr7:44455482(+) A-I intron -    22524474 chr7:44455485(+) A-I intron -    22524474 chr7:44455491(+) A-I intron -    22524474 chr7:44455494(+) A-I intron -    22524474 chr7:44455503(+) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Lrrc4b	chr7:44442778-44442779(+) m6A 5'UTR//intron       25683224//24981863//22608085 chr7:44442813-44442814(+) m6A 5'UTR//intron       25683224//24981863//22608085 chr7:44444900-44444901(+) m6A 5'UTR       25683224//24981863 chr7:44445189-44445190(+) m6A CDS       25683224//22608085 chr7:44445201-44445202(+) m6A CDS       25683224//24981863//22608085 chr7:44461021-44461022(+) m6A CDS       25683224//24981863//22608085 chr7:44461069-44461070(+) m6A CDS       25683224//24981863//22608085 chr7:44461130-44461131(+) m6A CDS       25683224//24981863//26404942//22608085 chr7:44461273-44461274(+) m6A CDS       25683224//24981863//22608085 chr7:44461333-44461334(+) m6A CDS       25683224//24981863//22608085 chr7:44461372-44461373(+) m6A CDS       25683224//24981863//22608085 chr7:44461426-44461427(+) m6A CDS       25683224//24981863//22608085 chr7:44461435-44461436(+) m6A CDS       25683224//24981863//22608085 chr7:44461558-44461559(+) m6A CDS       25683224//24981863//22608085 chr7:44461636-44461637(+) m6A CDS       25683224//25456834//24981863//22608085 chr7:44461695-44461696(+) m6A CDS       25683224//25456834//24981863//22608085 chr7:44461774-44461775(+) m6A CDS       25683224//24981863//26404942//22608085 chr7:44461825-44461826(+) m6A CDS       25683224//24981863//26404942//22608085 chr7:44461999-44462000(+) m6A CDS       25683224//24981863//26404942//22608085 chr7:44462029-44462030(+) m6A CDS       25683224//24981863//26404942//22608085 chr7:44462080-44462081(+) m6A CDS       25683224//24981863//26404942//22608085 chr7:44462398-44462399(+) m6A CDS       25683224//25456834//24981863//26404942//22608085 chr7:44462418-44462419(+) m6A CDS       25683224//25456834//24981863//26404942//22608085 chr7:44462638-44462639(+) m6A CDS       25683224//24981863//22608085 chr7:44462671-44462672(+) m6A CDS       25683224//24981863//22608085 chr7:44462780-44462781(+) m6A CDS       25683224//25456834//24981863//26404942//22608085 chr7:44462823-44462824(+) m6A CDS       25683224//25456834//24981863//26404942//22608085 chr7:44462835-44462836(+) m6A 3'UTR       25683224//25456834//24981863//26404942//22608085 chr7:44462927-44462928(+) m6A 3'UTR       25683224//25456834//24981863//26404942//22608085 chr7:44462935-44462936(+) m6A 3'UTR       25683224//25456834//24981863//22608085 chr7:44463153-44463154(+) m6A 3'UTR       25683224//24981863 chr7:44463162-44463163(+) m6A 3'UTR       25683224//24981863 chr7:44463257-44463258(+) m6A 3'UTR       25683224//24981863 chr7:44463329-44463330(+) m6A 3'UTR       25683224//24981863

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-7-5p
Interactor2: Lrrc4b

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar