Detail Information

Basic Information:


  VIRBase ID:  

VHID00642810

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:           Slc29a4:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-7-5p Slc29a4
miRBase
Accession/Entrez ID
MIMAT0001570 243328
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - ENT//ENT4//mPM//mPMAT

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Slc29a4
chr5:142692574-142692575(+) m6A 5'UTR       24981863
chr5:142702152-142702153(+) m6A 5'UTR//intron       24981863
chr5:142702166-142702167(+) m6A 5'UTR//intron       24981863
chr5:142702172-142702173(+) m6A 5'UTR//intron       24981863
chr5:142722197-142722198(+) m6A 3'UTR       25683224//25456834//24981863
chr5:142722275-142722276(+) m6A 3'UTR       25683224//25456834//24981863//25569111
chr5:142722307-142722308(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr5:142722335-142722336(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr5:142722369-142722370(+) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085
chr5:142722484-142722485(+) m6A 3'UTR       25683224//25456834//24981863//25569111

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-7-5p
Interactor2: Slc29a4

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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