Basic Information:

  VIRBase ID:  

VHID00642806

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:  MIMAT0001570          2900026A02Rik:  NM_172884     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-7-5p	2900026A02Rik
miRBase Accession/Entrez ID	MIMAT0001570	243219
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	8430408O14Rik//A530094D01//AW539426//Gm449//Kiaa1671//mKIAA1671

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	2900026A02Rik	chr5:113516854(-) A-I      3'UTR chr5:113517027(-) A-I      3'UTR chr5:113517035(-) A-I      3'UTR chr5:113516801(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	2900026A02Rik	chr5:113087834(-) C-I exon 3'UTR    22448268 chr5:113087781(-) A-I exon 3'UTR    22524474 chr5:113088007(-) A-I exon 3'UTR    22524474 chr5:113088015(-) A-I exon 3'UTR    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	2900026A02Rik	chr5:113086361-113086362(-) m6A 3'UTR       24981863//25569111//22608085 chr5:113086391-113086392(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:113086433-113086434(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:113086500-113086501(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:113086517-113086518(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:113086541-113086542(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:113086582-113086583(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:113086690-113086691(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085 chr5:113087072-113087073(-) m6A 3'UTR       24981863 chr5:113087105-113087106(-) m6A 3'UTR       24981863 chr5:113089007-113089008(-) m6A 3'UTR       24981863 chr5:113089401-113089402(-) m6A 3'UTR       24981863//25569111 chr5:113089520-113089521(-) m6A 3'UTR       24981863//25569111 chr5:113089807-113089808(-) m6A 3'UTR       25456834//24981863//25569111 chr5:113089849-113089850(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr5:113090074-113090075(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:113090134-113090135(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:113090159-113090160(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:113090174-113090175(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:113090217-113090218(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:113090400-113090401(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:113090584-113090585(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:113090683-113090684(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:113090693-113090694(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:113090852-113090853(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:113090865-113090866(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960 chr5:113090903-113090904(-) m6A 3'UTR       25683224//24981863//25569111 chr5:113090972-113090973(-) m6A 3'UTR       24981863//25569111 chr5:113091000-113091001(-) m6A 3'UTR       24981863//25569111 chr5:113101479-113101480(-) m6A CDS       25683224//22608085 chr5:113101489-113101490(-) m6A CDS       25683224//22608085 chr5:113137723-113137724(-) m6A CDS//intron       25683224//25569111 chr5:113137731-113137732(-) m6A CDS//intron       25683224//25569111 chr5:113137812-113137813(-) m6A CDS//intron       25683224//24981863//25569111 chr5:113137949-113137950(-) m6A CDS//intron       24981863//25569111 chr5:113163075-113163076(-) m6A CDS//intron       24981863//25569111 chr5:113163103-113163104(-) m6A CDS//intron       24981863//25569111 chr5:113163153-113163154(-) m6A 5'UTR//intron       25569111 chr5:113163311-113163312(-) m6A 5'UTR//intron       25569111 chr5:113175298-113175299(-) m6A CDS       25683224//25569111 chr5:113175310-113175311(-) m6A CDS       25683224//25569111 chr5:113175325-113175326(-) m6A CDS       25683224//25569111 chr5:113182092-113182093(-) m6A CDS       25683224//25569111 chr5:113182112-113182113(-) m6A CDS       25683224//24981863//25569111 chr5:113182129-113182130(-) m6A CDS       25683224//24981863//25569111 chr5:113182149-113182150(-) m6A CDS       25683224//24981863//25569111 chr5:113182240-113182241(-) m6A CDS       25683224//24981863//25569111 chr5:113182274-113182275(-) m6A CDS       25683224//24981863//25569111 chr5:113182666-113182667(-) m6A CDS       25683224//24981863 chr5:113182768-113182769(-) m6A CDS       25683224//24981863//25569111 chr5:113182784-113182785(-) m6A CDS       25683224//24981863//25456834//25569111 chr5:113182904-113182905(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113182955-113182956(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113182996-113182997(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113183059-113183060(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113183078-113183079(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113183083-113183084(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113183107-113183108(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113183124-113183125(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113183134-113183135(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113183141-113183142(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113183258-113183259(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113183271-113183272(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113183288-113183289(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113183399-113183400(-) m6A CDS       25456834//24981863//25569111//22608085 chr5:113183435-113183436(-) m6A CDS       25456834//24981863//25569111//22608085 chr5:113183463-113183464(-) m6A CDS       25456834//24981863//25569111//22608085 chr5:113183505-113183506(-) m6A CDS       25683224//24981863//25569111//22608085 chr5:113183579-113183580(-) m6A CDS       25683224//24981863//25569111 chr5:113183596-113183597(-) m6A CDS       25683224//24981863//25569111 chr5:113183716-113183717(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113183726-113183727(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113183867-113183868(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113183890-113183891(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113183909-113183910(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113183920-113183921(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113183931-113183932(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113184225-113184226(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113184270-113184271(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113184325-113184326(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113184346-113184347(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113184355-113184356(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113184372-113184373(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113184402-113184403(-) m6A CDS       25683224//24981863//25569111 chr5:113184483-113184484(-) m6A CDS       25683224//24981863//25569111//22608085 chr5:113184604-113184605(-) m6A CDS       25683224 chr5:113184612-113184613(-) m6A CDS       25683224 chr5:113184635-113184636(-) m6A CDS       25683224 chr5:113188362-113188363(-) m6A CDS       25683224//25569111 chr5:113190605-113190606(-) m6A CDS       25683224//25569111 chr5:113190675-113190676(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113190685-113190686(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113190807-113190808(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113190862-113190863(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113190929-113190930(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113191033-113191034(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113191048-113191049(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113191103-113191104(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113191113-113191114(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113191125-113191126(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113191186-113191187(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113191248-113191249(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113191275-113191276(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113191295-113191296(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113191455-113191456(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113191527-113191528(-) m6A CDS       25683224//25456834//24981863//25569111 chr5:113191688-113191689(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113191702-113191703(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113191779-113191780(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113191795-113191796(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113191833-113191834(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113191858-113191859(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr5:113191978-113191979(-) m6A CDS       25569111//22608085 chr5:113192031-113192032(-) m6A CDS       25683224//25569111 chr5:113192053-113192054(-) m6A CDS       25683224//25569111 chr5:113192065-113192066(-) m6A CDS       25683224//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-7-5p
Interactor2: 2900026A02Rik

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar