Basic Information:

  VIRBase ID:  

VHID00642786

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:  MIMAT0001570          D430041D05Rik:  NM_001033347     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-7-5p	D430041D05Rik
miRBase Accession/Entrez ID	MIMAT0001570	241589
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	9630056G07Rik//G2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	D430041D05Rik	chr2:104228133(-) A-I      intronic chr2:104228079(-) A-I      intronic chr2:104233938(-) A-I      intronic chr2:104228123(-) A-I      intronic chr2:104233932(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	D430041D05Rik	chr2:104387922(-) A-I intron -    22524474 chr2:104387966(-) A-I intron -    22524474 chr2:104387976(-) A-I intron -    22524474 chr2:104393775(-) A-I intron -    22524474 chr2:104393781(-) A-I intron -    22524474

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	D430041D05Rik	chr2:104143256-104143257(-) m6A 3'UTR       24981863//22608085 chr2:104143272-104143273(-) m6A 3'UTR       24981863//22608085 chr2:104143506-104143507(-) m6A 3'UTR       24981863 chr2:104143546-104143547(-) m6A 3'UTR       24981863//26404942//22608085 chr2:104143653-104143654(-) m6A 3'UTR       24981863//22608085 chr2:104143663-104143664(-) m6A 3'UTR       24981863//22608085 chr2:104143679-104143680(-) m6A 3'UTR       24981863//22608085 chr2:104143705-104143706(-) m6A 3'UTR       24981863//22608085 chr2:104143710-104143711(-) m6A 3'UTR       24981863//22608085 chr2:104143765-104143766(-) m6A 3'UTR       24981863 chr2:104145685-104145686(-) m6A 3'UTR       24981863 chr2:104145771-104145772(-) m6A 3'UTR       24981863 chr2:104145897-104145898(-) m6A 3'UTR       24981863 chr2:104146032-104146033(-) m6A 3'UTR       24981863 chr2:104146057-104146058(-) m6A 3'UTR       24981863 chr2:104146182-104146183(-) m6A 3'UTR       24981863//22608085 chr2:104146189-104146190(-) m6A 3'UTR       24981863 chr2:104146240-104146241(-) m6A 3'UTR       24981863 chr2:104146348-104146349(-) m6A 3'UTR       24981863 chr2:104146416-104146417(-) m6A 3'UTR       24981863 chr2:104146462-104146463(-) m6A 3'UTR       24981863 chr2:104146512-104146513(-) m6A 3'UTR       24981863//22608085 chr2:104146557-104146558(-) m6A 3'UTR       24981863//22608085 chr2:104146583-104146584(-) m6A 3'UTR       24981863//22608085 chr2:104146702-104146703(-) m6A 3'UTR       24981863//22608085 chr2:104146720-104146721(-) m6A 3'UTR       24981863//22608085 chr2:104146759-104146760(-) m6A 3'UTR       25456834//24981863//26404942//22608085 chr2:104146768-104146769(-) m6A 3'UTR       25456834//24981863//26404942//22608085 chr2:104146843-104146844(-) m6A 3'UTR       25456834//24981863//26404942//22608085 chr2:104146872-104146873(-) m6A 3'UTR       24981863//26404942//22608085 chr2:104146923-104146924(-) m6A 3'UTR       24981863//22608085 chr2:104146940-104146941(-) m6A 3'UTR       24981863 chr2:104146972-104146973(-) m6A 3'UTR       24981863 chr2:104147168-104147169(-) m6A 3'UTR//exon       24981863 chr2:104147217-104147218(-) m6A 3'UTR//exon       24981863 chr2:104147254-104147255(-) m6A 3'UTR//exon       24981863 chr2:104147270-104147271(-) m6A 3'UTR//exon       24981863 chr2:104147293-104147294(-) m6A 3'UTR//exon       24981863 chr2:104147451-104147452(-) m6A 3'UTR//exon       24981863//22608085 chr2:104147499-104147500(-) m6A 3'UTR//exon       24981863//22608085 chr2:104147529-104147530(-) m6A 3'UTR//exon       24981863//22608085 chr2:104147586-104147587(-) m6A 3'UTR//exon       24981863//22608085 chr2:104147638-104147639(-) m6A 3'UTR//exon       24981863//22608085 chr2:104147660-104147661(-) m6A 3'UTR//exon       24981863//22608085 chr2:104147745-104147746(-) m6A 3'UTR//exon       24981863//26404942//22608085 chr2:104147819-104147820(-) m6A 3'UTR//exon       24981863//26404942//22608085 chr2:104147899-104147900(-) m6A 3'UTR//exon       24981863//26404942//22608085 chr2:104147918-104147919(-) m6A 3'UTR//exon       24981863//26404942//22608085 chr2:104148008-104148009(-) m6A 3'UTR//exon       24981863//22608085 chr2:104148086-104148087(-) m6A 3'UTR//exon       24981863//22608085 chr2:104148243-104148244(-) m6A 3'UTR//exon       24981863//22608085 chr2:104148336-104148337(-) m6A 3'UTR//exon       24981863//22608085 chr2:104148519-104148520(-) m6A 3'UTR//exon       25456834//24981863//22608085 chr2:104148556-104148557(-) m6A 3'UTR//exon       25456834//24981863//22608085 chr2:104148611-104148612(-) m6A 3'UTR//exon       25456834//24981863//22608085 chr2:104148619-104148620(-) m6A 3'UTR//exon       24981863//26404942//22608085 chr2:104148680-104148681(-) m6A 3'UTR//exon       24981863//22608085 chr2:104148806-104148807(-) m6A CDS//exon       24981863//22608085 chr2:104148886-104148887(-) m6A CDS//exon       24981863//22608085 chr2:104192549-104192550(-) m6A CDS//exon       24981863//22608085 chr2:104201114-104201115(-) m6A CDS//exon       24981863//22608085 chr2:104201143-104201144(-) m6A CDS//exon       24981863//22608085 chr2:104201150-104201151(-) m6A CDS//exon       24981863//22608085 chr2:104255541-104255542(-) m6A CDS//intron       24981863 chr2:104255564-104255565(-) m6A CDS//intron       24981863 chr2:104256018-104256019(-) m6A CDS//exon//intron       24981863 chr2:104256042-104256043(-) m6A CDS//exon//intron       24981863 chr2:104256063-104256064(-) m6A CDS//exon//intron       24981863 chr2:104256198-104256199(-) m6A CDS//exon//intron       24981863//22608085 chr2:104256344-104256345(-) m6A CDS//exon//intron       24981863//22608085 chr2:104256374-104256375(-) m6A CDS//exon//intron       24981863//22608085 chr2:104256426-104256427(-) m6A CDS//exon//intron       24981863//22608085 chr2:104256446-104256447(-) m6A CDS//exon//intron       24981863//22608085 chr2:104256464-104256465(-) m6A CDS//exon//intron       24981863//22608085 chr2:104256568-104256569(-) m6A CDS//exon//intron       24981863//22608085 chr2:104256599-104256600(-) m6A CDS//exon//intron       24981863//22608085 chr2:104256663-104256664(-) m6A CDS//exon//intron       24981863 chr2:104256909-104256910(-) m6A CDS//exon//intron       24981863//22608085 chr2:104257026-104257027(-) m6A CDS//exon//intron       25456834//24981863//22608085 chr2:104257047-104257048(-) m6A CDS//exon//intron       25456834//24981863//22608085 chr2:104257070-104257071(-) m6A CDS//exon//intron       25456834//24981863//22608085 chr2:104257092-104257093(-) m6A CDS//exon//intron       25456834//24981863//22608085 chr2:104257120-104257121(-) m6A CDS//exon//intron       24981863//22608085 chr2:104257694-104257695(-) m6A exon//intron       24981863//22608085 chr2:104257699-104257700(-) m6A exon//intron       24981863//22608085 chr2:104258171-104258172(-) m6A CDS//intron       24981863//22608085 chr2:104258202-104258203(-) m6A CDS//intron       25456834//24981863//22608085 chr2:104258214-104258215(-) m6A CDS//intron       25456834//24981863//22608085 chr2:104258225-104258226(-) m6A CDS//intron       25456834//24981863//22608085 chr2:104258254-104258255(-) m6A CDS//intron       25456834//24981863//22608085 chr2:104258285-104258286(-) m6A CDS//intron       25456834//24981863//22608085 chr2:104258301-104258302(-) m6A CDS//intron       25456834//24981863//22608085 chr2:104258328-104258329(-) m6A CDS//intron       25456834//24981863//22608085 chr2:104258368-104258369(-) m6A CDS//intron       25456834//24981863//22608085 chr2:104258390-104258391(-) m6A CDS//intron       25456834//24981863//22608085 chr2:104258505-104258506(-) m6A CDS//intron       24981863 chr2:104409974-104409975(-) m6A CDS       24981863 chr2:104410095-104410096(-) m6A CDS       24981863 chr2:104410171-104410172(-) m6A 5'UTR       24981863//25569111

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-7-5p
Interactor2: D430041D05Rik

Evidence Support:

Prediction-Evidence	cRep//Rep
Support Database	RepTar