Basic Information:

  VIRBase ID:  

VHID00642760

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:  MIMAT0001570          Lrp12:  NM_001347036     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-7-5p	Lrp12
miRBase Accession/Entrez ID	MIMAT0001570	239393
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	AI848829//C820005L12Rik//LRP-12

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Lrp12	chr15:39871051-39871052(-) m6A 3'UTR       24981863 chr15:39871177-39871178(-) m6A 3'UTR       24981863//25569111 chr15:39871262-39871263(-) m6A 3'UTR       24981863//25569111//26404942//22608085 chr15:39871308-39871309(-) m6A 3'UTR       25456834//24981863//25569111//26404942//22608085 chr15:39871357-39871358(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr15:39871408-39871409(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr15:39871413-39871414(-) m6A 3'UTR       25456834//24981863//25569111//22608085 chr15:39871500-39871501(-) m6A 3'UTR       24981863//25569111//22608085 chr15:39871564-39871565(-) m6A 3'UTR       24981863//25569111//22608085 chr15:39871945-39871946(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085 chr15:39871999-39872000(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:39872012-39872013(-) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:39872078-39872079(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:39872139-39872140(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:39872153-39872154(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:39872173-39872174(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:39872192-39872193(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:39872215-39872216(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:39872240-39872241(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:39872312-39872313(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:39872320-39872321(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:39872336-39872337(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:39872679-39872680(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:39872861-39872862(-) m6A CDS       25569111 chr15:39877923-39877924(-) m6A CDS       25683224//24981863//25569111//22608085 chr15:39877995-39877996(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:39878034-39878035(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:39878064-39878065(-) m6A CDS       25683224//25412662//24981863//25569111//22608085 chr15:39878330-39878331(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:39878414-39878415(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:39878459-39878460(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:39878505-39878506(-) m6A CDS       25683224//25456834//24981863//25569111//22608085 chr15:39878594-39878595(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:39878616-39878617(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:39878634-39878635(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085//22575960 chr15:39878649-39878650(-) m6A CDS       25683224//25456834//25412662//24981863//25569111//22608085 chr15:39878796-39878797(-) m6A CDS       25683224//25412662 chr15:39878880-39878881(-) m6A CDS       25683224//25412662

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Lrp12	Nucleus Neuroblastoma cell line (N2A)     22406755

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-7-5p
Interactor2: Lrp12

Evidence Support:

Prediction-Evidence	cRep
Support Database	RepTar