Detail Information

Basic Information:


  VIRBase ID:  

VHID00642738

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:           C2cd4c:      

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Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-7-5p C2cd4c
miRBase
Accession/Entrez ID
MIMAT0001570 237397
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 4932409I22Rik//Fam148//Fam148c//Gm238

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase C2cd4c
chr10:79611911-79611912(-) m6A 3'UTR       24981863
chr10:79612106-79612107(-) m6A CDS       24981863//22608085
chr10:79612196-79612197(-) m6A CDS       24981863//22608085
chr10:79612223-79612224(-) m6A CDS       24981863//22608085
chr10:79612508-79612509(-) m6A CDS       25456834//24981863//25569111
chr10:79612558-79612559(-) m6A CDS       25456834//24981863//25569111
chr10:79612586-79612587(-) m6A CDS       25456834//24981863//25569111
chr10:79612884-79612885(-) m6A CDS       25456834//24981863//25569111//22608085
chr10:79612959-79612960(-) m6A CDS       25456834//24981863//25569111//22608085
chr10:79612964-79612965(-) m6A CDS       25456834//24981863//25569111//22608085
chr10:79613090-79613091(-) m6A CDS       25456834//24981863//25569111//22608085
chr10:79613117-79613118(-) m6A CDS       25456834//24981863//25569111//22608085
chr10:79613125-79613126(-) m6A CDS       25456834//24981863//25569111//22608085
chr10:79613186-79613187(-) m6A CDS       25683224//25456834//24981863//25569111//22608085
chr10:79613231-79613232(-) m6A CDS       25683224//25456834//24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-7-5p
Interactor2: C2cd4c

Evidence Support:


Prediction-Evidence cRep//Rep
Support Database RepTar

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