Basic Information:

  VIRBase ID:  

VHID00642075

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.4752

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:  MIMAT0001570          Wasl:  NM_028459     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-7-5p	Wasl
miRBase Accession/Entrez ID	MIMAT0001570	73178
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	2900021I12Rik//3110031I02Rik//N-//N-WASP

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Wasl	chr6:24614464-24614465(-) m6A 3'UTR       24981863//25456834 chr6:24614496-24614497(-) m6A 3'UTR       24981863//25456834 chr6:24614552-24614553(-) m6A 3'UTR       24981863//25456834 chr6:24614616-24614617(-) m6A 3'UTR       24981863 chr6:24614637-24614638(-) m6A 3'UTR       24981863 chr6:24616242-24616243(-) m6A 3'UTR       25412662 chr6:24616288-24616289(-) m6A CDS       25412662 chr6:24619215-24619216(-) m6A CDS       25412662 chr6:24619262-24619263(-) m6A CDS       25412662 chr6:24619317-24619318(-) m6A CDS       25412662 chr6:24619509-24619510(-) m6A CDS       25683224//25412662//24981863//25456834 chr6:24619670-24619671(-) m6A CDS       25683224//25412662//24981863 chr6:24624239-24624240(-) m6A CDS       25683224//25412662//24981863 chr6:24624248-24624249(-) m6A CDS       25683224//25412662//24981863//22608085 chr6:24624277-24624278(-) m6A CDS       25683224//25412662//24981863//22608085 chr6:24626687-24626688(-) m6A exon//intron       24981863 chr6:24626709-24626710(-) m6A CDS//exon       24981863 chr6:24633163-24633164(-) m6A CDS//intron       24981863 chr6:24633201-24633202(-) m6A CDS//intron       24981863 chr6:24664705-24664706(-) m6A 5'UTR//exon       25412662//24981863//25569111 chr6:24664879-24664880(-) m6A 5'UTR//exon       25456834//25412662//24981863//25569111 chr6:24664922-24664923(-) m6A 5'UTR//exon       25683224//25456834//25412662//24981863//25569111

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	Wasl	Exosome Mast cells     17486113

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-7-5p
Interactor2: Wasl

Evidence Support:

Weak-Evidence	qCLASH
Support Database	ViRBase

References:

PMID	31363027	Target region	None
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	B cells	Interactor2 expression	None
Description	Table S4. Host mRNA targets of mghv-miR-M1-7-5p and mghv-miR-M1-7-3p identified by qCLASH in HE2.1 B cells.