Basic Information:

  VIRBase ID:  

VHID00642063

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.4752

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:  MIMAT0001570          Zdhhc4:  NM_001359445     

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Interactor Information:

	Interactor1	Interactor2
Symbol	mghv-miR-M1-7-5p	Zdhhc4
miRBase Accession/Entrez ID	MIMAT0001570	72881
Organism	Murid gammaherpesvirus 4 (MuHV-4)	Mus musculus
Category	miRNA	mRNA
Alias	-	1810021D01Rik//2900029I10Rik//DHHC-4

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	Zdhhc4	chr5:143316623-143316624(-) m6A 3'UTR//CDS       24981863 chr5:143324471-143324472(-) m6A exon//intron       25412662 chr5:143325371-143325372(-) m6A exon//intron       25412662 chr5:143328550-143328551(-) m6A 5'UTR//exon       24981863//25569111 chr5:143328697-143328698(-) m6A 5'UTR//exon//intron       25456834//24981863//25569111 chr5:143328705-143328706(-) m6A 5'UTR//exon//intron       25456834//24981863//25569111 chr5:143328713-143328714(-) m6A 5'UTR//exon//intron       25456834//24981863//25569111 chr5:143328779-143328780(-) m6A 5'UTR//exon//intron       25456834//24981863//25569111 chr5:143328800-143328801(-) m6A 5'UTR//exon//intron       25683224//25456834//24981863//25569111 chr5:143329110-143329111(-) m6A 5'UTR//exon//intron       25412662

Interaction Network (The top 100 interactions):

Interactor1: mghv-miR-M1-7-5p
Interactor2: Zdhhc4

Evidence Support:

Weak-Evidence	qCLASH
Support Database	ViRBase

References:

PMID	31363027	Target region	None
Source	ViRBase	Interactor1 expression	None
Tissue or cell line	B cells	Interactor2 expression	None
Description	Table S4. Host mRNA targets of mghv-miR-M1-7-5p and mghv-miR-M1-7-3p identified by qCLASH in HE2.1 B cells.