Detail Information

Basic Information:


  VIRBase ID:  

VHID00642046

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:           Otud6b:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-7-5p Otud6b
miRBase
Accession/Entrez ID
MIMAT0001570 72201
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 2600013N14Rik//AU015433

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Otud6b
chr4:14810047-14810048(-) m6A 3'UTR       24981863
chr4:14810075-14810076(-) m6A 3'UTR       25683224//24981863//25456834
chr4:14810163-14810164(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr4:14810182-14810183(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr4:14810192-14810193(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr4:14810211-14810212(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr4:14810263-14810264(-) m6A 3'UTR       25683224//25456834//24981863//25569111//22608085//22575960
chr4:14810333-14810334(-) m6A 3'UTR       25456834//24981863//25569111
chr4:14811486-14811487(-) m6A 3'UTR       25683224//24981863
chr4:14811534-14811535(-) m6A 3'UTR       25683224//24981863
chr4:14811587-14811588(-) m6A 3'UTR       25683224//24981863
chr4:14812531-14812532(-) m6A 3'UTR//CDS       24981863//22608085
chr4:14815630-14815631(-) m6A 3'UTR//CDS       24981863//25569111
chr4:14818204-14818205(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111
chr4:14818238-14818239(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111
chr4:14818256-14818257(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111
chr4:14818291-14818292(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111
chr4:14818296-14818297(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111
chr4:14818353-14818354(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111
chr4:14818392-14818393(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111
chr4:14818410-14818411(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111
chr4:14818426-14818427(-) m6A 3'UTR//CDS       25683224//25456834//25412662//24981863//25569111
chr4:14819166-14819167(-) m6A 3'UTR//intron       25683224//25412662//24981863
chr4:14822743-14822744(-) m6A CDS       25683224//25412662//24981863
chr4:14825505-14825506(-) m6A CDS       25683224//25412662//24981863
chr4:14825537-14825538(-) m6A CDS       25683224//25412662//24981863
chr4:14825549-14825550(-) m6A CDS       25683224//25412662//24981863

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-7-5p
Interactor2: Otud6b

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

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