Detail Information

Basic Information:


  VIRBase ID:  

VHID00641717

  Virus:  

Murid gammaherpesvirus 4 (MuHV-4)

  Host:  

Mus musculus

  Confidence Score:  

0.1828

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      mghv-miR-M1-7-5p:           Maea:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol mghv-miR-M1-7-5p Maea
miRBase
Accession/Entrez ID
MIMAT0001570 59003
Organism Murid gammaherpesvirus 4 (MuHV-4) Mus musculus
Category miRNA mRNA
Alias - 1110030D19Rik//EMP//Gid//Gid9

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase Maea
chr5:33344863-33344864(+) m6A CDS//intron       25683224
chr5:33358451-33358452(+) m6A 3'UTR//5'UTR//CDS       25683224//22608085
chr5:33358458-33358459(+) m6A 3'UTR//5'UTR//CDS       25683224//22608085
chr5:33358485-33358486(+) m6A 3'UTR//5'UTR//CDS       25683224//22608085
chr5:33358499-33358500(+) m6A 3'UTR//5'UTR//CDS       25683224//22608085
chr5:33358538-33358539(+) m6A 3'UTR//CDS       25683224//22608085
chr5:33358563-33358564(+) m6A 3'UTR//CDS       25683224//22608085
chr5:33365762-33365763(+) m6A CDS//exon       25412662//22608085
chr5:33365776-33365777(+) m6A CDS//exon       25412662//22608085
chr5:33371678-33371679(+) m6A CDS//exon       25683224//22608085
chr5:33372446-33372447(+) m6A 3'UTR//exon       24981863//25569111//26404942
chr5:33372552-33372553(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr5:33372625-33372626(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr5:33372746-33372747(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//22608085//22575960
chr5:33373047-33373048(+) m6A 3'UTR       25683224//25456834//25412662//24981863//25569111//26404942//22608085//22575960
chr5:33373117-33373118(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr5:33373158-33373159(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr5:33373166-33373167(+) m6A 3'UTR       25683224//25456834//24981863//25569111//26404942//22608085
chr5:33373249-33373250(+) m6A 3'UTR       24981863//25456834//25569111//22608085

Interaction Network (The top 100 interactions):


Interactor1: mghv-miR-M1-7-5p
Interactor2: Maea

Evidence Support:


Prediction-Evidence cRep
Support Database RepTar

Starting a new search, please wait ...